Factsheet for PGSC0003DMT400059084

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g095510.2.1	Tomato	cytosol	96.13	96.54
Os07t0680900-01	Rice	extracellular	62.15	68.97
GSMUA_Achr5P27890_001	Banana	cytosol	66.67	67.83
CDY58648	Canola	cytosol	61.29	67.22
Os03t0334000-02	Rice	cytosol	67.96	65.83
AT3G08720.2	Thale cress	cytosol, plastid	66.02	65.18
Bra029712.1-P	Field mustard	cytosol	63.23	65.04
CDY36000	Canola	cytosol	63.23	65.04
Bra040056.1-P	Field mustard	cytosol	56.77	64.86
Bra029713.1-P	Field mustard	cytosol	64.3	64.86
CDY36001	Canola	cytosol, mitochondrion	64.3	64.72
CDY27982	Canola	cytosol, mitochondrion	63.87	64.57
CDY58649	Canola	cytosol	63.44	64.41
CDY27983	Canola	cytosol	63.01	64.4
Zm00001d029050_P002	Maize	cytosol	66.45	64.24
CDY22167	Canola	cytosol	63.44	64.13
Bra040057.1-P	Field mustard	cytosol	63.44	64.13
AT3G08730.2	Thale cress	cytosol, mitochondrion	64.09	64.09
TraesCS4B01G170700.1	Wheat	cytosol	66.24	64.03
TraesCS4D01G172700.1	Wheat	plastid	66.24	64.03
KRH16956	Soybean	cytosol, plastid	64.95	63.98
CDY22166	Canola	cytosol	60.22	63.21
KXG39433	Sorghum	cytosol	66.02	63.17
PGSC0003DMT400080233	Potato	cytosol, plastid	64.52	63.16
HORVU4Hr1G050660.6	Barley	cytosol	66.24	62.86
Zm00001d022434_P001	Maize	cytosol	65.59	62.76
EER97738	Sorghum	cytosol	65.59	62.76
TraesCS4A01G134300.2	Wheat	cytosol	65.59	62.63
HORVU2Hr1G017630.2	Barley	cytosol	65.16	62.35
TraesCS2D01G104200.1	Wheat	cytosol	65.16	62.35
TraesCS2A01G104500.1	Wheat	cytosol	65.16	62.35
TraesCS2B01G121500.1	Wheat	cytosol	64.52	61.73
Zm00001d047531_P001	Maize	cytosol, plastid	63.66	61.54
PGSC0003DMT400083117	Potato	cytosol, plastid	51.83	51.72
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.49	27.22
PGSC0003DMT400039856	Potato	cytosol	28.6	26.6
PGSC0003DMT400000873	Potato	cytosol	28.6	26.18
PGSC0003DMT400065573	Potato	cytosol	28.39	25.73
PGSC0003DMT400020578	Potato	cytosol	29.03	25.62
PGSC0003DMT400070360	Potato	cytosol	24.73	23.76
PGSC0003DMT400043552	Potato	cytosol	24.3	23.59
PGSC0003DMT400013171	Potato	cytosol	25.16	12.37
PGSC0003DMT400074067	Potato	cytosol	0.43	3.45
PGSC0003DMT400074066	Potato	nucleus, plastid	3.87	2.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102588352	MapMan:18.4.6.3	MapMan:27.7.2.1	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961
InterPro:Kinase-like_dom_sf	UniProt:M1C3S0	PFAM:PF00069	PFAM:PF00433	EnsemblPlantsGene:PGSC0003DMG400022950	PGSC:PGSC0003DMG400022950
EnsemblPlants:PGSC0003DMT400059084	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351
PANTHER:PTHR24351:SF80	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002959D24	RefSeq:XP_006367440.1	SEG:seg	:

Description

Ribosomal protein S6 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022950]

Coordinates

chr3:+:36246796..36253499

Molecular Weight (calculated)

52004.1 Da

IEP (calculated)

6.831

GRAVY (calculated)

-0.316

Length

465 amino acids

Sequence
(BLAST)

001: MVSAKISQPT GQPFHNHVLL PLQHPKVASL DDVDMDFSDI FGPAPAQVLS SENVAMSETN GFIYDEPAVI YSRSHSFVGP TNYVCQSLKL SKLTLRENEH
101: LLELVEGDSG ETNDHLEEAT SDSAVTNKSD VHADANTPRS VGLNDFEVLK VVGQGAFGKV YQVRKIGTSE ILAMKVMRKD KILEKDHAEY MKTERDVLTK
201: IDHPFVVQLR YSFQTKYRLY LVLDFVNGGH LFFQLHRQGL FREDLARIYT AEVVSAVSHL HSNGVMHRDL KPENILLDAD GHVVLTDFGL AKQFDENTRS
301: NSLCGTIEYM APEIVLGKGH DKAADWWSVG VLLYEMLTGK PPFVGNRQKV QQKIIKDKIK LPAFLSSDAH SLLKGLLHKD ASKRLGCGSI GSDEIKSHKW
401: FKSIYWKKLD AREIQPSFCP QVSGKLCIAN FEEQWTSMPL LDSPAASPKS GDNPFKGFSY VRPAE

Best Arabidopsis Sequence Match ( AT3G08720.1 )
(BLAST)

001: MVSSQCSVAN KNQTGKPFQK HLSLSISPPK SVLGDNLELQ FSDVFGPMPE ANSEEACDVA YDEPAVVYSR SHSLVGPSLV VSHSLKMNKL TLRETEDSVD
101: LVECVEGESI KENDEFSGND DTDSEKSPEE VSGVVGIEDF EVLKVVGQGA FGKVYQVRKK DTSEIYAMKV MRKDKIVEKN HAEYMKAERD ILTKIDHPFI
201: VQLKYSFQTK YRLYLVLDFI NGGHLFFQLY HQGLFREDLA RVYTAEIVSA VSHLHEKGIM HRDLKPENIL MDVDGHVMLT DFGLAKEFEE NTRSNSMCGT
301: TEYMAPEIVR GKGHDKAADW WSVGILLYEM LTGKPPFLGS KGKIQQKIVK DKIKLPQFLS NEAHALLKGL LQKEPERRLG SGPSGAEEIK KHKWFKAINW
401: KKLEAREVQP SFKPAVSGRQ CIANFDKCWT DMSVLDSPAS SPNSDAKANP FTNFTYVRPP HSFLHRTTSN L

Arabidopsis Description

ATPK2Serine/threonine-protein kinase AtPK2/AtPK19 [Source:UniProtKB/Swiss-Prot;Acc:Q39030]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.