Factsheet for PGSC0003DMT400020578

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078870.2.1	Tomato	cytosol	98.67	98.48
PGSC0003DMT400039856	Potato	cytosol	82.16	86.6
KRH05680	Soybean	cytosol	80.83	81.14
VIT_18s0001g10470.t01	Wine grape	cytosol	80.27	80.57
KRH15363	Soybean	cytosol	79.32	79.92
AT5G09890.2	Thale cress	cytosol	75.52	77.13
CDY03775	Canola	cytosol	75.9	76.78
CDY46196	Canola	cytosol	75.71	76.58
Bra040471.1-P	Field mustard	cytosol	59.2	76.47
CDY56408	Canola	cytosol	76.28	75.99
Bra031468.1-P	Field mustard	cytosol	75.14	75.72
PGSC0003DMT400065573	Potato	cytosol	55.41	56.92
PGSC0003DMT400000873	Potato	cytosol	52.94	54.92
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.73	32.91
PGSC0003DMT400083117	Potato	cytosol, plastid	26.0	29.4
PGSC0003DMT400059084	Potato	cytosol	25.62	29.03
PGSC0003DMT400080233	Potato	cytosol, plastid	24.86	27.58
PGSC0003DMT400043552	Potato	cytosol	24.48	26.93
PGSC0003DMT400070360	Potato	cytosol	23.53	25.62
PGSC0003DMT400013171	Potato	cytosol	25.05	13.95
PGSC0003DMT400074067	Potato	cytosol	0.38	3.45
PGSC0003DMT400074066	Potato	nucleus, plastid	4.36	2.96

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102596457	MapMan:18.4.6.4	Gene3D:3.30.200.20	InterPro:AGC-kinase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf
UniProt:M1ADR1	PFAM:PF00069	PFAM:PF00433	EnsemblPlantsGene:PGSC0003DMG401007970	PGSC:PGSC0003DMG401007970	EnsemblPlants:PGSC0003DMT400020578
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF195
InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295DC79	RefSeq:XP_006354880.1	:	:	:

Description

Serine/threonine-protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401007970]

Coordinates

chr4:+:68192362..68199138

Molecular Weight (calculated)

60517.5 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.514

Length

527 amino acids

Sequence
(BLAST)

001: MEMEGVADGT VKLGALPMKP DRVFNNLEPE FTVSSPVTRQ KAAAAKQFIE NHYKNYLQGL QDRKERRWAL QRKAQEAQVP SDEQEKMLRN LEKRETEYMR
101: LQRHKVGIDD FEQLTVIGKG AFGEVRLCRF KSTGEIFAMK KLKKSDMLSR GQVEHVRSER NLLVEVDSRC IVKLFYSFQD SDFLYLIMEY LPGGDIMTLL
201: MREDVLSEVV ARFYIAESIL AIQSIHQHNY VHRDIKPDNL ILDRNGHLKL SDFGLCKPLE NKYSSILLED EDLTNAESIN GTEGHSGGDR ASWPMPKEQI
301: QQWKRNRRAL AYSTVGTLDY MAPEVLLKKG YGIECDWWSL GAILYEMLVG YPPFCSEHPR MTARKIISWR TCLKFPDEPK VSDEAKDLIC RLLCDVESRL
401: GTGGVEEIKA HPWFKGVNWD MLYEMEAAYK PIVTGELDTQ NFEKFPEVED PSSTTPRVGP WRKMLTSKDS NFIGFTFKKS DILKSAETSG IDMSSNGHSK
501: PPSLVSLFGR IDLQDTIEED QKEEHIL

Best Arabidopsis Sequence Match ( AT5G09890.1 )
(BLAST)

001: MDGADGTVRV KPGRGFETET DVAVSSPVTR QKAAAAKQFI ENHYKNYLQG LHERMERRRE FQRKVQEAQL PVEEQDEMMR NLARRETEYM RLQRRKIGID
101: DFELLTVIGK GAFGEVRLCR LRSTSEVYAM KKLKKTEMLS RGQVEHVRSE RNLLAEVDSR YIVKLFYSFQ DSECLYLIME YLPGGDIMTL LMREDILSED
201: VARFYIAESI LAIHSIHQHN YVHRDIKPDN LILDKSGHLK LSDFGLCKPL DDKYSSLLLE DDEMLSQDSE NQSGKSDADK APWQMPKEQL LQWKRNRRAL
301: AYSTVGTLDY MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSDDPR ITCRKIINWR VCLKFPEEPK ISDEARDLIC RLLCDVDSRL GTRGVEEIKS
401: HPWFKGTPWD KLYDMEAAYR PIVDGELDTQ NFEKFPEVEG SPSEAPQVGP WRKMLTSKDT NFIGFTFKKS DITRSMESSG ADMKSNGSGE APSLISLLGR
501: INMEEGEGGE LNHKT

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.