Factsheet for PGSC0003DMT400074066

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G17850.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT3G17850.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068920.2.1	Tomato	cytosol, plastid	94.98	57.7
Zm00001d013434_P001	Maize	cytosol	32.95	53.56
GSMUA_Achr10P...	Banana	nucleus	27.93	45.02
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	67.57	40.2
KRH39042	Soybean	cytosol, plastid	65.25	38.94
KRH48660	Soybean	cytosol, plastid	64.48	38.63
AT3G17850.1	Thale cress	cytosol, plastid	60.1	36.03
CDY61286	Canola	cytosol, plastid	56.89	35.99
GSMUA_Achr2P15960_001	Banana	cytosol	45.43	35.76
CDX95815	Canola	plastid	58.3	35.5
Bra022251.1-P	Field mustard	plastid	58.3	35.36
CDX92168	Canola	plastid	58.3	35.31
Bra021278.1-P	Field mustard	cytosol, plastid	56.89	35.19
AT1G48490.4	Thale cress	plastid	53.28	33.5
CDX77308	Canola	cytosol, plastid	48.91	31.35
Bra014141.1-P	Field mustard	cytosol, plastid	48.91	31.33
OQU91111	Sorghum	cytosol, plastid	50.84	31.32
Os03t0711800-01	Rice	plasma membrane	50.58	31.02
Zm00001d033726_P002	Maize	cytosol, plastid	49.94	30.67
TraesCS4A01G267800.1	Wheat	plastid	48.91	30.33
TraesCS4D01G045500.2	Wheat	plastid	48.65	30.17
TraesCS4B01G046600.2	Wheat	plastid	48.65	30.1
Zm00001d013435_P009	Maize	cytosol, plastid	48.26	29.74
HORVU4Hr1G007540.1	Barley	cytosol	48.65	28.75
GSMUA_Achr7P10290_001	Banana	cytosol, plastid	42.21	26.62
CDY49673	Canola	cytosol	30.12	23.76
CDX93672	Canola	cytosol, mitochondrion	28.19	23.55
Bra018730.1-P	Field mustard	cytosol, mitochondrion	27.93	23.41
CDY41826	Canola	cytosol	20.46	20.54
GSMUA_Achr10P...	Banana	cytosol	15.96	17.79
PGSC0003DMT400013171	Potato	cytosol	20.85	17.12
PGSC0003DMT400074067	Potato	cytosol	0.64	8.62
Zm00001d013439_P007	Maize	cytosol	6.82	7.98
GSMUA_Achr2P15970_001	Banana	cytosol	2.7	6.84
PGSC0003DMT400065573	Potato	cytosol	2.96	4.48
PGSC0003DMT400020578	Potato	cytosol	2.96	4.36
PGSC0003DMT400059084	Potato	cytosol	2.32	3.87
PGSC0003DMT400083117	Potato	cytosol, plastid	2.19	3.65
PGSC0003DMT400039856	Potato	cytosol	2.32	3.6
PGSC0003DMT400000873	Potato	cytosol	2.32	3.54
PGSC0003DMT400080233	Potato	cytosol, plastid	2.06	3.37
PGSC0003DMT400070360	Potato	cytosol	1.29	2.07
PGSC0003DMT400043552	Potato	cytosol	1.03	1.67
CDY67568	Canola	cytosol	0.9	1.36
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.26	0.63

Protein Annotations

EnsemblPlants:PGSC0003DMT400074066	EnsemblPlantsGene:PGSC0003DMG401028785	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF155	PGSC:PGSC0003DMG401028785
SEG:seg	UniParc:UPI0002951A97	UniProt:M1CT31	MapMan:18.4.6.1	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401028785]

Coordinates

chr6:-:50620205..50627902

Molecular Weight (calculated)

85336.2 Da

IEP (calculated)

7.913

GRAVY (calculated)

-0.700

Length

777 amino acids

Sequence
(BLAST)

001: MVFKGRFFSS KKSDPSSPDG SSNSPRSIGS NSPIRSDKKK AKSGSTSKDN SPITPSSIST FKDKNKDDKG KESPSPNSAK NPVRTREPEL RPTSVSVSPI
101: VASSLGLNKI KTRSGPLPQE SFFGYASRDK VNSLGASNLS KNVAGGRGGG EGLSSSVLRK KDEKRSLVVG SAENVDNRSN SDSMSSESGR SRDQSPRVPG
201: PSRLQNGESS SEAGRVSSSW GYSGGLRSSD ACTPELKTSL ECDNPKESES PRFQALLRVT SAPRKRFPAD IKSFSHELNS KGVRPFPFWK PRGLNNLEEV
301: LTMIRAKFDK AKEEVDNDLR VFAADLVGVL EKNAETHPDW QETIEDLLVL ARRCAMTSPG EFWLQCEGIV QELDDRRQEL PMGTLKQLHT RMLFILTRCT
401: RLLQFHKESG FAEDEPLFQL RQSLQPVERR RDGKMSGPLK FPKLPHTKKS YSQEQHGSEW KRDQAVQLGN LPTSEAETAK TLDSPGSRNR MASWKKFPTP
501: PAKSPKEASP IKEENIDIGI EASKLFSDEK GPSASDLATV KHPDLSSARD SLAHSSVPPS KHQRNVSWGY WCDQPSVSDE SSIICRICEE EVPTLHVEDH
601: SRICAIADRC DQKSLSVNER LLRVADTLEK LMESFAHKDI PHAVGSPDGA KVSNCILTEE SELLSPKLSD GSCRGSEDML DCLPEVDNSV FMDELKSLPS
701: MSCRTRFGPK SDQGMTTSSA GSMTPRSPLL TPKTSPIDLL LAGKGCASEH DDLPQVDTTM ILQYVCLSVH FFFGDTT

Best Arabidopsis Sequence Match ( AT3G17850.1 )
(BLAST)

0001: MVFKNKLFFS SKKSGSSSPD SSNSPRSVGS NSPIRSDKKK SKSASKDEPP IPIPGFVGVG CKQTQIKDGL KKKDGSSKGK QLSSEVQAHS IGKSNLSPSS
0101: EVKKPPPPEV KEGPAFVSPI MASSLGLNRI KTRSGPLPQE RVFNYRNDPA TSNLSKMGAD GGDLGSGSAT SGSGSGNRKK EAGSSKLGLE ENMDRTRPSD
0201: NKSDRDSLSP DTGPPRSLSP TLPPSGSRLQ NVASSSGTGR SEMSSGRSGP LRNSDFCTPE NSYEWENPKE SESPRYQALL RMTSAPRKRF PGDIKSFSHE
0301: LNSKGVRPFP LWKPRRSNNV EEVLNLIRAK FEKAKEEVNS DLAVFAADLV GVLEKNAESH PEWEETFEDL LILARSCAMT TPGDFWLQCE GIVQDLDDRR
0401: QELPPGVLKQ LHTRMLFILT RCTRLLQFHK ESWGEEEQVV QLRQSRVLHS IEKIPPSGAG RSYSAAKVPS TKKAYSQEQH GLDWKEDAVV RSVPPLAPPE
0501: NYAIKESESP ANIDRMSSWK KLPSPALKTV KEAPASEEQN DSKVEPPNIV GSRQGRDDAA VAILNFPPAK DSHEHSSKHR HNISWGYWGE QPLISEESSI
0601: MCRICEEEVP TTHVEDHSRV CTLADKYDQK GLSVDERLMA VAGTLDKIAE TFRHKDSLAA AESPDGMKVS NSHLTEESDV LSPRLSDWSR KGSEDMLDCF
0701: PEADNSIFMD DLRGLPLMSC RTRFGPKSDQ GMTTSSASSM TPRSPIPTPR PDPIEQILGG KGTFHDQDDI PQMSELADIA KCAADAIPGD DQSIPFLLSC
0801: LEDLRVVIDR RKFDALTVET FGTRIEKLIR EKYVHMCELM DDEKVDLLST VIDEDAPLED DVVRSLRTSP VHPRDRTSID DFEIIKPISR GAFGRVFLAK
0901: KRTTGDLFAI KVLKKADMIR KNAVESILAE RDILINVRNP FVVRFFYSFT CRDNLYLVME YLNGGDLYSL LRNLGCLEED IVRVYIAEVV LALEYLHSEG
1001: VVHRDLKPDN LLIAHDGHIK LTDFGLSKVG LINSTDDLAG PAVSGTSLLD EEESRLAASE EQLERRKKRS AVGTPDYLAP EILLGTGHGA TADWWSVGII
1101: LFELIVGIPP FNAEHPQQIF DNILNRKIPW PHVPEEMSAE AHDIIDRFLT EDPHQRLGAR GAAEVKQHIF FKDINWDTLA RQKAAFVPAS ESAIDTSYFR
1201: SRYSWNTSDE QFFPSGEVPD YSDADSMTNS SGCSSNHHEE GEAEECEGHA EFESGIPVDY SFSNFSFKNL SQLASINYDL LSKGWKDEPQ QIPHHK

Arabidopsis Description

IREH1Probable serine/threonine protein kinase IREH1 [Source:UniProtKB/Swiss-Prot;Acc:F4J6F6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.