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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 2
  • nucleus 1
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92168 Canola plastid 98.75 98.21
CDY67568 Canola cytosol 38.95 96.32
CDY61286 Canola cytosol, plastid 91.07 94.63
AT3G17850.1 Thale cress cytosol, plastid 88.32 86.96
CDY41826 Canola cytosol 44.67 73.64
GSMUA_Achr10P... Banana cytosol 38.4 70.3
GSMUA_Achr2P15970_001 Banana cytosol 16.77 69.71
CDX77308 Canola cytosol, plastid 65.75 69.22
Solyc06g068920.2.1 Tomato cytosol, plastid 67.16 67.01
VIT_17s0000g02000.t01 Wine grape cytosol, plastid 67.95 66.39
Solyc03g118530.2.1 Tomato cytosol, plastid 66.3 65.38
CDX93672 Canola cytosol, mitochondrion 44.83 61.51
CDY49673 Canola cytosol 47.18 61.12
Zm00001d013439_P007 Maize cytosol 31.5 60.54
CDY30714 Canola cytosol 23.59 59.02
OQU91111 Sorghum cytosol, plastid 57.92 58.6
Os03t0711800-01 Rice plasma membrane 58.07 58.48
PGSC0003DMT400074066 Potato nucleus, plastid 35.5 58.3
TraesCS4A01G267800.1 Wheat plastid 56.58 57.62
TraesCS4D01G045500.2 Wheat plastid 56.43 57.46
TraesCS4B01G046600.2 Wheat plastid 56.5 57.4
GSMUA_Achr7P10290_001 Banana cytosol, plastid 55.17 57.14
Zm00001d013435_P009 Maize cytosol, plastid 56.35 57.02
HORVU4Hr1G007540.1 Barley cytosol 56.58 54.9
GSMUA_Achr2P15960_001 Banana cytosol 42.24 54.61
Zm00001d033726_P002 Maize cytosol, plastid 54.08 54.55
Zm00001d013434_P001 Maize cytosol 19.12 51.05
CDX86906 Canola cytosol 42.48 48.44
CDY00276 Canola cytosol 42.32 48.26
GSMUA_Achr10P... Banana nucleus 16.54 43.78
CDY17064 Canola cytosol 33.93 40.97
CDY43221 Canola cytosol 33.86 40.83
CDY58648 Canola cytosol 11.76 35.38
CDY22166 Canola cytosol 11.76 33.86
CDY22167 Canola cytosol 12.07 33.48
CDY36000 Canola cytosol 11.83 33.41
CDY58649 Canola cytosol 11.91 33.19
CDY27982 Canola cytosol, mitochondrion 11.91 33.04
CDY27983 Canola cytosol 11.76 32.97
CDY36001 Canola cytosol, mitochondrion 11.76 32.47
CDY46196 Canola cytosol 12.62 30.9
CDY65082 Canola cytosol 11.6 30.77
CDY03775 Canola cytosol 12.54 30.71
CDX89854 Canola cytosol 8.15 30.68
CDY69024 Canola cytosol 11.44 30.48
CDX75322 Canola endoplasmic reticulum 12.38 30.44
CDY56408 Canola cytosol 12.62 30.43
CDX68937 Canola cytosol 12.3 30.25
CDY67156 Canola cytosol 11.21 30.11
CDX85087 Canola cytosol 12.7 29.4
CDX77529 Canola cytosol 12.62 29.22
CDY02314 Canola cytosol 12.77 29.0
CDY09553 Canola cytosol, plastid 12.77 29.0
CDY12763 Canola cytosol 12.46 28.86
CDY49415 Canola cytosol 12.46 28.86
CDY67274 Canola cytosol 11.91 28.84
CDY65084 Canola cytosol 11.99 27.72
CDY31963 Canola cytosol 12.38 27.43
CDY68313 Canola cytosol 9.64 26.62
CDY41359 Canola cytosol 9.64 25.26
CDY08594 Canola cytosol 9.48 25.16
CDY00952 Canola cytosol 9.48 25.05
CDX90255 Canola cytosol 12.38 25.04
CDX70218 Canola cytosol 9.33 24.29
CDY44862 Canola cytosol 9.25 24.13
CDY09005 Canola cytosol 8.54 23.24
CDY12061 Canola cytosol 11.36 22.76
CDY70020 Canola cytosol 3.45 19.91
CDY05763 Canola cytosol 12.38 13.64
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.1Gene3D:3.30.200.20GO:A0A078E206InterPro:AGC-kinase_CEnsemblPlants:CDX95815
ProteinID:CDX95815ProteinID:CDX95815.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00101761001
InterPro:IPR000719InterPro:IPR000961InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108PFscan:PS50011
PFscan:PS51285PANTHER:PTHR24356PANTHER:PTHR24356:SF155InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEB8DASEG:seg:::
Description
BnaC05g35660D
Coordinates
chrLK031891:+:473229..479381
Molecular Weight (calculated)
141132.0 Da
IEP (calculated)
5.810
GRAVY (calculated)
-0.556
Length
1276 amino acids
Sequence
(BLAST)
0001: MVFKNKLFFS SKKSGSSSPD SSNSPRSVGS NSPNPSDKKK SKSASKDESP ISSPSSLGGF GCKQASSIKD GLKKNKGKEV PSPHSIGKSN LSPKNEGGPA
0101: FVSPIMASSL GLNRIKTRSG PLPRESVFNF RSDEKTPPLL CTSKLSKMAT DTGSGSGSGS ATSGFGSGDK KKEAGSVMLR FEENMSRAQA SDRDSSMSPD
0201: TGGPPKSLSP TLPPSGSRLQ NAASSSGAGR SGPIKSSDFC TPENSYEWEN PKESESPRYQ ALLRMTSAPR KRFPGDIKSF SHELNSKGVR PFPLWKPRRS
0301: NNVEEILVLI RAKFDKAKEE VNSDLKVFAA DLVGILEKNA ESHPEWEETF EDLLILARSC AMTTPGDFWL QCEGIVQDLD DRRQELPQGV LKQLHTRMLF
0401: ILTRCTRLLQ FHKESWGEEE QVVQLRQSRV LHSIEKIPPS GPGRSSSAAK VLKMPPSTKK AYSQEQRGLQ WKEDVVVRSV PPLSPPENDV LKESESPANI
0501: DRMSSWKKLP SPVLKTVKEA PALEEQNHNK VEPSNLVRNR HAAVSTLSGP PAKDSHEHSP KHRHNISWGY WGEQPLVSEE SSIMCRICEE EVPTTHVEDH
0601: SRICTLADKY DQKGLSVDER LMAVAGTLDK IAETFRHKDS LAAGESPDGM KVSNSNLTQE CDVLSPRLSD WSRRGSEDML DCLPETDNSV FMDDLRGLPL
0701: MSCKTRFGSK SDQGMTTSSA SSMTPRSPIP TPRPDPIEMI LGGKGTFHDH DEYPQMSELA DIAKCAADAI PGDEQSIPFL LSCLGDLRVV IDRSKFDALT
0801: VETFGTRIEK LIREKYLQIC ELLDDEKVDL SSTVIDEDAP LEDDVVRGLR TSPVHPRDRT SIDDFEIIKP ISRGAFGRVF LAKKKATGDL FAIKVLKKAD
0901: MIRKNAVESI LAERDILINV RNPFVVRFFY SFTCRDNLYL VMEYLNGGDL YSLLRNLGCL EEDIVRVYIA EVVLALEYLH SEGVVHRDLK PDNLLIAHDG
1001: HIKLTDFGLS KVGLINSTDD LSGPGISLLD EEESRLPTSE HQLERRKKRS AVGTPDYLAP EILLGTGHAA TADWWSVGII LFELIVGIPP FNAEQPQQIF
1101: DNILNRNIPW PHVPEEMSAE AHDIIDRFLT EDPHLRLGAR GAAEVKQHVF FKDINWDTLA RQKAAFVPAS ESAIDTSYFR SRYSWNTSDE QFFPSGEVQD
1201: YSDADSLSGS SGCSSSGHEE GEVEESDGQA ESESGVPVDY SFSNFSFKNL SQLASINYDL LSKGWKDEPQ PNSRPK
Best Arabidopsis Sequence Match ( AT3G17850.1 )
(BLAST)
0001: MVFKNKLFFS SKKSGSSSPD SSNSPRSVGS NSPIRSDKKK SKSASKDEPP IPIPGFVGVG CKQTQIKDGL KKKDGSSKGK QLSSEVQAHS IGKSNLSPSS
0101: EVKKPPPPEV KEGPAFVSPI MASSLGLNRI KTRSGPLPQE RVFNYRNDPA TSNLSKMGAD GGDLGSGSAT SGSGSGNRKK EAGSSKLGLE ENMDRTRPSD
0201: NKSDRDSLSP DTGPPRSLSP TLPPSGSRLQ NVASSSGTGR SEMSSGRSGP LRNSDFCTPE NSYEWENPKE SESPRYQALL RMTSAPRKRF PGDIKSFSHE
0301: LNSKGVRPFP LWKPRRSNNV EEVLNLIRAK FEKAKEEVNS DLAVFAADLV GVLEKNAESH PEWEETFEDL LILARSCAMT TPGDFWLQCE GIVQDLDDRR
0401: QELPPGVLKQ LHTRMLFILT RCTRLLQFHK ESWGEEEQVV QLRQSRVLHS IEKIPPSGAG RSYSAAKVPS TKKAYSQEQH GLDWKEDAVV RSVPPLAPPE
0501: NYAIKESESP ANIDRMSSWK KLPSPALKTV KEAPASEEQN DSKVEPPNIV GSRQGRDDAA VAILNFPPAK DSHEHSSKHR HNISWGYWGE QPLISEESSI
0601: MCRICEEEVP TTHVEDHSRV CTLADKYDQK GLSVDERLMA VAGTLDKIAE TFRHKDSLAA AESPDGMKVS NSHLTEESDV LSPRLSDWSR KGSEDMLDCF
0701: PEADNSIFMD DLRGLPLMSC RTRFGPKSDQ GMTTSSASSM TPRSPIPTPR PDPIEQILGG KGTFHDQDDI PQMSELADIA KCAADAIPGD DQSIPFLLSC
0801: LEDLRVVIDR RKFDALTVET FGTRIEKLIR EKYVHMCELM DDEKVDLLST VIDEDAPLED DVVRSLRTSP VHPRDRTSID DFEIIKPISR GAFGRVFLAK
0901: KRTTGDLFAI KVLKKADMIR KNAVESILAE RDILINVRNP FVVRFFYSFT CRDNLYLVME YLNGGDLYSL LRNLGCLEED IVRVYIAEVV LALEYLHSEG
1001: VVHRDLKPDN LLIAHDGHIK LTDFGLSKVG LINSTDDLAG PAVSGTSLLD EEESRLAASE EQLERRKKRS AVGTPDYLAP EILLGTGHGA TADWWSVGII
1101: LFELIVGIPP FNAEHPQQIF DNILNRKIPW PHVPEEMSAE AHDIIDRFLT EDPHQRLGAR GAAEVKQHIF FKDINWDTLA RQKAAFVPAS ESAIDTSYFR
1201: SRYSWNTSDE QFFPSGEVPD YSDADSMTNS SGCSSNHHEE GEAEECEGHA EFESGIPVDY SFSNFSFKNL SQLASINYDL LSKGWKDEPQ QIPHHK
Arabidopsis Description
IREH1Probable serine/threonine protein kinase IREH1 [Source:UniProtKB/Swiss-Prot;Acc:F4J6F6]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.