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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029850.1-P Field mustard cytosol 98.34 98.75
CDY08594 Canola cytosol 98.34 98.75
CDY41359 Canola cytosol 92.13 91.38
CDY68313 Canola cytosol 86.75 90.69
AT3G10540.1 Thale cress cytosol 90.27 89.71
CDX70218 Canola cytosol 87.78 86.53
CDY44862 Canola cytosol 87.58 86.5
PGSC0003DMT400043552 Potato cytosol 78.88 79.54
KRG92082 Soybean cytosol 80.75 79.43
Solyc03g071750.2.1 Tomato cytosol 79.3 79.3
KRH34704 Soybean cytosol 80.12 78.82
PGSC0003DMT400070360 Potato cytosol 78.88 78.72
VIT_13s0074g00100.t01 Wine grape cytosol 81.78 78.06
Solyc11g007760.1.1 Tomato cytosol 78.88 77.13
GSMUA_Achr5P26030_001 Banana cytosol 71.43 68.73
GSMUA_Achr10P... Banana cytosol 70.6 68.2
Zm00001d042676_P001 Maize cytosol 50.72 67.49
Os01t0872800-01 Rice cytosol 69.57 67.47
EES03961 Sorghum cytosol 68.74 65.87
TraesCS3D01G376500.1 Wheat cytosol 68.53 65.29
TraesCS3A01G383400.1 Wheat cytosol, plastid 68.12 65.02
TraesCS3B01G415800.1 Wheat cytosol 67.7 65.01
HORVU3Hr1G082260.4 Barley cytosol 68.12 61.73
CDY58648 Canola cytosol 23.81 27.12
CDY67156 Canola cytosol 25.67 26.11
CDY22166 Canola cytosol 23.81 25.96
CDY69024 Canola cytosol 25.67 25.89
CDY36000 Canola cytosol 24.22 25.89
CDY27982 Canola cytosol, mitochondrion 24.64 25.87
CDY22167 Canola cytosol 24.43 25.65
CDY58649 Canola cytosol 24.22 25.55
CDY27983 Canola cytosol 24.02 25.49
CDY36001 Canola cytosol, mitochondrion 24.22 25.32
CDX68937 Canola cytosol 26.5 24.66
CDY03775 Canola cytosol 26.29 24.38
CDY46196 Canola cytosol 26.29 24.38
CDY65082 Canola cytosol 24.22 24.32
CDX75322 Canola endoplasmic reticulum 26.09 24.28
CDY49415 Canola cytosol 27.54 24.14
CDY12763 Canola cytosol 27.54 24.14
CDY56408 Canola cytosol 26.29 24.01
CDY67274 Canola cytosol 25.88 23.72
CDX77529 Canola cytosol 26.92 23.59
CDX85087 Canola cytosol 26.92 23.59
CDY09553 Canola cytosol, plastid 26.92 23.13
CDY02314 Canola cytosol 26.92 23.13
CDY67568 Canola cytosol 24.22 22.67
CDY65084 Canola cytosol 25.88 22.64
CDY30714 Canola cytosol 23.81 22.55
CDY31963 Canola cytosol 26.71 22.4
CDY70020 Canola cytosol 9.73 21.27
CDX90255 Canola cytosol 27.12 20.76
CDX89854 Canola cytosol 14.49 20.65
CDY09005 Canola cytosol 18.84 19.4
CDY12061 Canola cytosol 24.43 18.52
CDY41826 Canola cytosol 24.43 15.25
CDX93672 Canola cytosol, mitochondrion 23.6 12.26
CDY49673 Canola cytosol 23.19 11.37
CDX86906 Canola cytosol 26.29 11.35
CDY00276 Canola cytosol 26.29 11.35
CDY17064 Canola cytosol 24.64 11.26
CDY43221 Canola cytosol 24.64 11.25
CDY05763 Canola cytosol 26.5 11.05
CDY61286 Canola cytosol, plastid 25.26 9.93
CDX77308 Canola cytosol, plastid 24.84 9.9
CDX95815 Canola plastid 25.05 9.48
CDX92168 Canola plastid 24.84 9.35
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.6.2Gene3D:2.30.29.30Gene3D:3.30.200.20GO:A0A078EII0EnsemblPlants:CDY00952ProteinID:CDY00952
ProteinID:CDY00952.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00110961001InterPro:IPR000719
InterPro:IPR011993InterPro:Kinase-like_dom_sfInterPro:PDK1-typ_PHPFAM:PF00069PFAM:PF14593InterPro:PH-like_dom_sf
PIRSF:PIRSF000654ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24356PANTHER:PTHR24356:SF163InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF50729SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEDC72SEG:seg
Description
BnaC05g42480D
Coordinates
chrLK031923:+:292906..295358
Molecular Weight (calculated)
53818.9 Da
IEP (calculated)
8.192
GRAVY (calculated)
-0.438
Length
483 amino acids
Sequence
(BLAST)
001: MEDEFDSKLS LQGNASNVEG SISRSKSFAF KAPQENFTVQ DFELDKIYGV GSYSKVVRAT KKKDGGVYAL KIMDKKFITK ENKTAYVKLE RIVLDQLDHP
101: GIVKLFFTFQ DNFSLYMALE SCEGGELFDQ ITRKGCLSED EARFYGAEVV DALEYIHTMG LIHRDIKPEN LLLTSDGHIK IADFGSVKPM QDSQITLLPN
201: AASDDKACTF VGTAAYVPPE VLNSSPATFG NDLWALGCTL YQMLSGTSPF KDASEWLIFQ RIIARDLKFP NHFSEAARDL IDRLLDTDPS RRPGAGPEGY
301: ASLKRHPFFK GVDWKKPRSQ TPPKLAPDPS SQSASPERDG SPWNPTHVGD ASAMQNNGPS STSESSGSIT RLASIDSFDS RWQQFLEPGE SVIMLSAVKK
401: LRKITNKKVQ LILTNKPRLI YVDPSKLVAK GNIIWSDNSS DLNVQISSPS HFKICTPKKV LSIEDSKQRA LQWRKAIETL QNR
Best Arabidopsis Sequence Match ( AT3G10540.1 )
(BLAST)
001: MLTMDKEFDS KLTLQGNSSS NGETISRSKS FAFKAPQENF TYHDFELGKI YGVGSYSKVV RAKKKDNGTV YALKIMDKKF ITKENKTAYV KLERIVLDQL
101: EHPGIVKLFF TFQDTQSLYM ALESCEGGEL FDQITRKGRL SEDEARFYSA EVVDALEYIH NMGLIHRDIK PENLLLTLDG HIKIADFGSV KPMQDSQITV
201: LPNAASDDKA CTFVGTAAYV PPEVLNSSPA TFGNDLWALG CTLYQMLSGT SPFKDASEWL IFQRIIARDI KFPNHFSEAA RDLIDRLLDT DPSRRPGAGS
301: EGYDSLKRHP FFKGVDWKNL RSQTPPKLAP DPASQSASPE RDGSPWNPTH VGDTSVLQND GHNGLSESSG SITRLASIDS FDSRWQQFLE PGESVLMISA
401: VKKLQKITSK KVQLILTNKP RLIYVDPSKL VVKGNIIWSD NSNDLNVQVS SPSHFKICTP KKVLSFEDAK QRALQWKKAI ETLQNR
Arabidopsis Description
PDPK23-phosphoinositide-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.