Factsheet for Zm00001d042676_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003812_P002
Zm00001d005135_P001
Zm00001d005976_P008
Zm00001d017889_P001
Zm00001d020858_P001
Zm00001d025342_P003
Zm00001d028447_P001
Zm00001d031068_P001
Zm00001d033234_P001
Zm00001d039654_P001
Zm00001d041063_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04510.1	Zm00001d028447_P001	AT1G53700.1	16973627
AT5G04510.1	Zm00001d039654_P001	AT2G26700.1	16973627
AT5G04510.1	Zm00001d031068_P001	AT2G34650.1	16601102
AT5G04510.1	Zm00001d033234_P001	AT2G34650.1	16601102
AT5G04510.1	Zm00001d003812_P002	AT2G36350.1	16973627
AT5G04510.1	Zm00001d025342_P003	AT2G36350.1	16973627
AT5G04510.1	Zm00001d041063_P001	AT2G36350.1	16973627
AT5G04510.1	Zm00001d028447_P001	AT3G14370.1	16973627
AT5G04510.1	Zm00001d005135_P001	AT5G47750.1	16973627
AT5G04510.1	Zm00001d005976_P008	AT5G47750.1	16973627
AT5G04510.1	Zm00001d017889_P001	AT5G47750.1	16973627
AT5G04510.1	Zm00001d020858_P001	AT5G47750.1	16973627
AT5G04510.1	Zm00001d005135_P001	AT5G47750.1	21798944
AT5G04510.1	Zm00001d005976_P008	AT5G47750.1	21798944
AT5G04510.1	Zm00001d017889_P001	AT5G47750.1	21798944
AT5G04510.1	Zm00001d020858_P001	AT5G47750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03961	Sorghum	cytosol	94.49	68.06
Os01t0872800-01	Rice	cytosol	86.23	62.85
TraesCS3D01G376500.1	Wheat	cytosol	86.5	61.93
TraesCS3A01G383400.1	Wheat	cytosol, plastid	85.95	61.66
TraesCS3B01G415800.1	Wheat	cytosol	84.85	61.23
HORVU3Hr1G082260.4	Barley	cytosol	85.4	58.16
GSMUA_Achr5P26030_001	Banana	cytosol	75.48	54.58
GSMUA_Achr10P...	Banana	cytosol	74.66	54.2
CDY68313	Canola	cytosol	68.32	53.68
PGSC0003DMT400070360	Potato	cytosol	69.97	52.48
Solyc11g007760.1.1	Tomato	cytosol	71.07	52.23
PGSC0003DMT400043552	Potato	cytosol	68.87	52.19
Solyc03g071750.2.1	Tomato	cytosol	69.15	51.97
AT3G10540.1	Thale cress	cytosol	68.87	51.44
CDY08594	Canola	cytosol	68.04	51.35
Bra029850.1-P	Field mustard	cytosol	68.04	51.35
VIT_13s0074g00100.t01	Wine grape	cytosol	71.07	50.99
KRG92082	Soybean	cytosol	68.87	50.92
CDY00952	Canola	cytosol	67.49	50.72
CDY41359	Canola	cytosol	68.04	50.72
KRH34704	Soybean	cytosol	68.59	50.71
Bra009447.1-P	Field mustard	cytosol	68.04	50.41
Bra034125.1-P	Field mustard	cytosol	67.77	50.31
AT5G04510.1	Thale cress	cytosol	68.04	50.31
CDX70218	Canola	cytosol	67.77	50.2
CDY44862	Canola	cytosol	67.49	50.1
Zm00001d051049_P001	Maize	cytosol	7.71	23.14
Zm00001d047531_P001	Maize	cytosol, plastid	30.03	22.66
Zm00001d029050_P002	Maize	cytosol	29.75	22.45
Zm00001d022434_P001	Maize	cytosol	30.03	22.43
Zm00001d010720_P001	Maize	cytosol	29.48	19.24
Zm00001d032716_P001	Maize	cytosol	29.2	19.0
Zm00001d008791_P001	Maize	cytosol	28.93	18.58
Zm00001d038672_P002	Maize	cytosol	28.37	18.56
Zm00001d009940_P005	Maize	cytosol	30.3	18.36
Zm00001d039526_P002	Maize	cytosol	29.2	18.28
Zm00001d031040_P005	Maize	nucleus	28.37	17.98
Zm00001d013439_P007	Maize	cytosol	30.58	16.72
Zm00001d041269_P010	Maize	cytosol	31.96	10.89
Zm00001d013435_P009	Maize	cytosol, plastid	31.96	9.2
Zm00001d033726_P002	Maize	cytosol, plastid	26.72	7.67
Zm00001d013434_P001	Maize	cytosol	1.1	0.84

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.2	Gene3D:3.30.200.20	UniProt:A0A1D6N620	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM36044.1	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24356	PANTHER:PTHR24356:SF163	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002212706	EnsemblPlantsGene:Zm00001d042676	EnsemblPlants:Zm00001d042676_P001
EnsemblPlants:Zm00001d042676_T001	SEG:seg	:	:	:	:

Description

phosphoinositide dependent protein kinase3 phosphoinositide dependent protein kinase3

Coordinates

chr3:+:176508463..176513579

Molecular Weight (calculated)

40328.2 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.192

Length

363 amino acids

Sequence
(BLAST)

001: MAVGGDDDSM ERDFAARLRL AHSPSPATPA AAASSSPTAA GGIAFRAPQE QFTADDFVLG KIYGVGSYSK VVRAKKKDTG RVYALKIMDK KFITKENKIS
101: YVKMERIVLD QLDHPGVIRL FFTFQDTYSL YMALESCEGG ELFDQIVRKG RLSEDDARFY AAEIVDILEY LHGLGLIHRD VKPENLLLTS DGHIKIADFG
201: SVKPTRDTPI KVLPNSTTER ACTFVGTAAY VPPEVLNSAP ATFGNDLWAL GCTLYQMLSG SSPFKDASEW LIFQRIIARD LKFPEYFSAE ARDLVDKLLD
301: VDPGKRPGAG PDGYSSLKEH PFFRGIDWKN LRKTRPPKLA IDANVFFVTY VNQIFTLFQP LSS

Best Arabidopsis Sequence Match ( AT3G10540.1 )
(BLAST)

001: MLTMDKEFDS KLTLQGNSSS NGETISRSKS FAFKAPQENF TYHDFELGKI YGVGSYSKVV RAKKKDNGTV YALKIMDKKF ITKENKTAYV KLERIVLDQL
101: EHPGIVKLFF TFQDTQSLYM ALESCEGGEL FDQITRKGRL SEDEARFYSA EVVDALEYIH NMGLIHRDIK PENLLLTLDG HIKIADFGSV KPMQDSQITV
201: LPNAASDDKA CTFVGTAAYV PPEVLNSSPA TFGNDLWALG CTLYQMLSGT SPFKDASEWL IFQRIIARDI KFPNHFSEAA RDLIDRLLDT DPSRRPGAGS
301: EGYDSLKRHP FFKGVDWKNL RSQTPPKLAP DPASQSASPE RDGSPWNPTH VGDTSVLQND GHNGLSESSG SITRLASIDS FDSRWQQFLE PGESVLMISA
401: VKKLQKITSK KVQLILTNKP RLIYVDPSKL VVKGNIIWSD NSNDLNVQVS SPSHFKICTP KKVLSFEDAK QRALQWKKAI ETLQNR

Arabidopsis Description

PDPK23-phosphoinositide-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.