CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX74407
CDX75049
CDX77055
CDX77795
CDX83710
CDX84133
CDX84294
CDX89320
CDX94306
CDX97569
CDX98447
CDY13725
CDY17273
CDY17708
CDY30287
CDY30659
CDY33329
CDY35093
CDY43662
CDY48186
CDY67737

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04510.1	CDY33329	AT1G16440.1	16973627
AT5G04510.1	CDY35093	AT1G16440.1	16973627
AT5G04510.1	CDY30659	AT1G53700.1	16973627
AT5G04510.1	CDY67737	AT1G53700.1	16973627
AT5G04510.1	CDX77055	AT2G26700.1	16973627
AT5G04510.1	CDY48186	AT2G26700.1	16973627
AT5G04510.1	CDX84294	AT2G34650.1	16601102
AT5G04510.1	CDY17273	AT2G34650.1	16601102
AT5G04510.1	CDY43662	AT2G34650.1	16601102
AT5G04510.1	CDX75049	AT2G36350.1	16973627
AT5G04510.1	CDX84133	AT2G36350.1	16973627
AT5G04510.1	CDX97569	AT3G14370.1	16973627
AT5G04510.1	CDX98447	AT3G14370.1	16973627
AT5G04510.1	CDX83710	AT3G27580.1	16973627
AT5G04510.1	CDY13725	AT3G27580.1	16973627
AT5G04510.1	CDX89320	AT4G26610.1	16973627
AT5G04510.1	CDX94306	AT4G26610.1	16973627
AT5G04510.1	CDX74407	AT5G40030.1	16973627
AT5G04510.1	CDY30287	AT5G40030.1	16973627
AT5G04510.1	CDX77795	AT5G47750.1	16973627
AT5G04510.1	CDY17708	AT5G47750.1	16973627
AT5G04510.1	CDX77795	AT5G47750.1	21798944
AT5G04510.1	CDY17708	AT5G47750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009447.1-P	Field mustard	cytosol	99.39	99.39
CDY44862	Canola	cytosol	98.98	99.18
AT5G04510.1	Thale cress	cytosol	93.06	92.87
CDY41359	Canola	cytosol	90.41	90.97
CDY68313	Canola	cytosol	85.1	90.26
CDY08594	Canola	cytosol	86.94	88.57
CDY00952	Canola	cytosol	86.53	87.78
KRG92082	Soybean	cytosol	82.04	81.87
PGSC0003DMT400043552	Potato	cytosol	80.0	81.84
Solyc03g071750.2.1	Tomato	cytosol	80.41	81.57
PGSC0003DMT400070360	Potato	cytosol	80.41	81.41
KRH34704	Soybean	cytosol	81.43	81.26
VIT_13s0074g00100.t01	Wine grape	cytosol	83.27	80.63
Solyc11g007760.1.1	Tomato	cytosol	81.02	80.36
GSMUA_Achr10P...	Banana	cytosol	71.02	69.6
GSMUA_Achr5P26030_001	Banana	cytosol	70.82	69.12
Zm00001d042676_P001	Maize	cytosol	50.2	67.77
Os01t0872800-01	Rice	cytosol	68.57	67.47
EES03961	Sorghum	cytosol	67.76	65.87
TraesCS3D01G376500.1	Wheat	cytosol	67.35	65.09
TraesCS3B01G415800.1	Wheat	cytosol	66.53	64.81
TraesCS3A01G383400.1	Wheat	cytosol, plastid	66.73	64.62
HORVU3Hr1G082260.4	Barley	cytosol	67.55	62.1
CDY58648	Canola	cytosol	22.45	25.94
CDY67156	Canola	cytosol	24.49	25.26
CDY22166	Canola	cytosol	22.65	25.06
CDY36000	Canola	cytosol	23.06	25.0
CDY58649	Canola	cytosol	23.27	24.89
CDY36001	Canola	cytosol, mitochondrion	23.27	24.68
CDY69024	Canola	cytosol	24.08	24.63
CDY27983	Canola	cytosol	22.86	24.62
CDY27982	Canola	cytosol, mitochondrion	23.06	24.57
CDY22167	Canola	cytosol	22.86	24.35
CDX68937	Canola	cytosol	25.71	24.28
CDY03775	Canola	cytosol	25.71	24.18
CDY46196	Canola	cytosol	25.71	24.18
CDY65082	Canola	cytosol	23.47	23.91
CDY56408	Canola	cytosol	25.71	23.82
CDX75322	Canola	endoplasmic reticulum	25.1	23.7
CDY49415	Canola	cytosol	26.33	23.41
CDY12763	Canola	cytosol	26.33	23.41
CDY67274	Canola	cytosol	25.1	23.34
CDX77529	Canola	cytosol	25.71	22.87
CDX85087	Canola	cytosol	25.71	22.87
CDY09553	Canola	cytosol, plastid	26.12	22.78
CDY02314	Canola	cytosol	26.12	22.78
CDY31963	Canola	cytosol	26.33	22.4
CDY65084	Canola	cytosol	24.9	22.1
CDY67568	Canola	cytosol	23.27	22.09
CDY30714	Canola	cytosol	22.65	21.76
CDY70020	Canola	cytosol	9.18	20.36
CDX90255	Canola	cytosol	26.12	20.29
CDX89854	Canola	cytosol	13.88	20.06
CDY09005	Canola	cytosol	18.16	18.98
CDY12061	Canola	cytosol	23.47	18.05
CDY41826	Canola	cytosol	24.08	15.25
CDX93672	Canola	cytosol, mitochondrion	23.47	12.37
CDY49673	Canola	cytosol	23.06	11.47
CDY17064	Canola	cytosol	24.08	11.16
CDY43221	Canola	cytosol	23.88	11.06
CDY05763	Canola	cytosol	26.12	11.05
CDX86906	Canola	cytosol	25.1	10.99
CDY00276	Canola	cytosol	25.1	10.99
CDX77308	Canola	cytosol, plastid	24.69	9.98
CDY61286	Canola	cytosol, plastid	24.69	9.85
CDX95815	Canola	plastid	24.29	9.33
CDX92168	Canola	plastid	24.08	9.2

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.6.2	Gene3D:2.30.29.30	Gene3D:3.30.200.20	GO:A0A078C5F5	EnsemblPlants:CDX70218	ProteinID:CDX70218
ProteinID:CDX70218.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00136344001	InterPro:IPR000719	InterPro:IPR011993
InterPro:Kinase-like_dom_sf	InterPro:PDK1-typ_PH	PFAM:PF00069	PFAM:PF14593	InterPro:PH-like_dom_sf	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24356	PANTHER:PTHR24356:SF163	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF50729	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE8F49	SEG:seg	:

Description

BnaA10g25670D

Coordinates

chrLK031790:-:3601893..3604844

Molecular Weight (calculated)

54479.0 Da

IEP (calculated)

8.967

GRAVY (calculated)

-0.347

Length

490 amino acids

Sequence
(BLAST)

001: MLAMEKEFDS KLVLQGNGGS VSRSKSFSFK APQENFTIQD FQLGKIYGVG SYSKVVRAKK KESGTVYALK IMDKKFITKE NKTAYVKLER IVLDQLDHPG
101: IIKLFFTFQD SFSLYMALES CEGGELFDQI TRKGRLSEEE ARFYSAQVVD ALEYIHSMGL IHRDIKPENL LLTSDGHIKI ADFGSVKPMQ DSRITVLPNA
201: ASDDKACTFV GTAAYVPPEV LNSSPATFGN DLWALGCTIY QMLSGTSPFK DASEWLIFQR IIARDIKFPS HFSEAARDLI DRLLDTDPSR RPGAGSEGYA
301: ALKRHPFFMG VDWKNLRSQT PPKLAPDPAS QTASPEREDA HGSSPWNPTH IGDSSAAHND GHSAPSTPSE SSSGSITRLA SIDSFDSRWQ QFLEPGESVL
401: MISAVKKLQK ITSKKVQLIL TNKPKLIYVD PSKLVVKGNI IWSDNSNDLN VVVTSPSHFK ICTPKKVLSF EDVKQRALVW KKAIETLQNR

Best Arabidopsis Sequence Match ( AT5G04510.1 )
(BLAST)

001: MLAMEKEFDS KLVLQGNSSN GANVSRSKSF SFKAPQENFT SHDFEFGKIY GVGSYSKVVR AKKKETGTVY ALKIMDKKFI TKENKTAYVK LERIVLDQLE
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R

Arabidopsis Description

PDPK13-phosphoinositide-dependent protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.