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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P15970_001 Banana cytosol 39.53 66.45
GSMUA_Achr10P... Banana cytosol 76.94 56.96
CDY30714 Canola cytosol 55.23 55.88
Zm00001d013439_P007 Maize cytosol 69.38 53.92
CDY41826 Canola cytosol 75.58 50.39
CDY61286 Canola cytosol, plastid 99.81 41.94
Bra021278.1-P Field mustard cytosol, plastid 99.42 40.84
CDX95815 Canola plastid 96.32 38.95
CDX92168 Canola plastid 96.32 38.74
AT3G17850.1 Thale cress cytosol, plastid 93.41 37.19
CDX93672 Canola cytosol, mitochondrion 65.12 36.13
CDY49673 Canola cytosol 67.44 35.33
CDY58648 Canola cytosol 26.55 32.31
GSMUA_Achr7P10290_001 Banana cytosol, plastid 77.13 32.31
CDX77308 Canola cytosol, plastid 75.39 32.1
VIT_17s0000g02000.t01 Wine grape cytosol, plastid 80.81 31.93
Solyc06g068920.2.1 Tomato cytosol, plastid 78.88 31.82
Solyc03g118530.2.1 Tomato cytosol, plastid 79.07 31.53
TraesCS4A01G267800.1 Wheat plastid 74.22 30.57
TraesCS4D01G045500.2 Wheat plastid 74.03 30.49
TraesCS4B01G046600.2 Wheat plastid 74.03 30.41
Os03t0711800-01 Rice plasma membrane 74.61 30.39
OQU91111 Sorghum cytosol, plastid 74.22 30.37
CDY22166 Canola cytosol 25.97 30.25
Zm00001d013435_P009 Maize cytosol, plastid 73.45 30.06
CDY69024 Canola cytosol 27.52 29.65
CDY22167 Canola cytosol 26.16 29.35
CDY67156 Canola cytosol 26.94 29.26
CDY58649 Canola cytosol 25.97 29.26
CDY36000 Canola cytosol 25.58 29.2
CDX86906 Canola cytosol 63.18 29.13
CDY00276 Canola cytosol 63.18 29.13
HORVU4Hr1G007540.1 Barley cytosol 73.84 28.97
CDY27983 Canola cytosol 25.39 28.79
CDY27982 Canola cytosol, mitochondrion 25.58 28.7
CDX75322 Canola endoplasmic reticulum 28.49 28.32
CDX68937 Canola cytosol 28.49 28.32
CDY36001 Canola cytosol, mitochondrion 25.19 28.14
CDY65082 Canola cytosol 26.16 28.07
CDY17064 Canola cytosol 57.17 27.91
CDY43221 Canola cytosol 57.17 27.88
CDY46196 Canola cytosol 28.1 27.83
CDY03775 Canola cytosol 28.1 27.83
CDY56408 Canola cytosol 28.1 27.41
Zm00001d033726_P002 Maize cytosol, plastid 66.28 27.04
CDY49415 Canola cytosol 28.68 26.86
CDY12763 Canola cytosol 28.68 26.86
CDX77529 Canola cytosol 28.29 26.5
CDX85087 Canola cytosol 28.29 26.5
CDY67274 Canola cytosol 26.94 26.38
CDY09553 Canola cytosol, plastid 28.1 25.8
CDY02314 Canola cytosol 28.1 25.8
CDY65084 Canola cytosol 27.13 25.36
CDY31963 Canola cytosol 28.29 25.35
CDY68313 Canola cytosol 22.67 25.32
CDX89854 Canola cytosol 16.47 25.07
CDY08594 Canola cytosol 22.67 24.32
CDY41359 Canola cytosol 22.87 24.23
CDY00952 Canola cytosol 22.67 24.22
CDY44862 Canola cytosol 22.09 23.31
CDX90255 Canola cytosol 28.49 23.3
CDX70218 Canola cytosol 22.09 23.27
CDY12061 Canola cytosol 26.16 21.19
GSMUA_Achr2P15960_001 Banana cytosol 39.34 20.57
CDY09005 Canola cytosol 18.22 20.04
CDY70020 Canola cytosol 8.53 19.91
CDY05763 Canola cytosol 28.29 12.61
PGSC0003DMT400074066 Potato nucleus, plastid 1.36 0.9
GSMUA_Achr10P... Banana nucleus 0.39 0.41
Zm00001d013434_P001 Maize cytosol 0.19 0.21
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.1Gene3D:3.30.200.20GO:A0A078JJ15UniProt:A0A078JJ15InterPro:AGC-kinase_C
EnsemblPlants:CDY67568ProteinID:CDY67568ProteinID:CDY67568.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00064461001InterPro:IPR000719InterPro:IPR000961InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00108PFscan:PS50011PFscan:PS51285PANTHER:PTHR24356PANTHER:PTHR24356:SF155InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDC569SEG:seg:
Description
BnaCnng55480DBnaCnng55480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ15]
Coordinates
chrLK036257:-:6398..9644
Molecular Weight (calculated)
58125.2 Da
IEP (calculated)
4.475
GRAVY (calculated)
-0.346
Length
516 amino acids
Sequence
(BLAST)
001: MSELADIAKC AADAIPGDEQ PIPFLLSCLE DLRVVIDRSK FEALTVETFG TRIEKLIREK YLQICELMDD EKVDLSSTVI DEDAPLEDDV ARNVHPRDRT
101: SIDDFEIIKP ISRGAFGRVF LAKKRTTGDL FAIKVLKKAD MIRKNAVESI LAERDILINV RNPFVVRFFY SFTDRDNLYL VMEYLNGGDL YSLLRNLGCL
201: EEDIVRVYIA EVVLALEYLH SEGVVHRDVK PDNLLIAHDG HIKLTDFGLS KVGLINSTDD LSGPGTSLLD EEESRLPTSE HQLERRKKRS AVGTPDYLAP
301: EILLGTGHGA TADWWSVGII LFELIVGIPP FNAEHPQQIF DNILNRNIPW PHVPEEMSAE AHDIIDRFLT EDPHLRLGAR GAAEVKQHSF FKDINWDTLA
401: RQKAAFVPAS ESAIDTSYFR SRYSWNTSDE QFFPSGEVED YSDADSLSGS SGCSSNRHEE GEVEESDGQA EFESGVPVDY SFSNFSFKNL SQLASINYDL
501: LSKGWKDEPQ PNSRQK
Best Arabidopsis Sequence Match ( AT1G48490.1 )
(BLAST)
0001: MVFKSKLFFS SKKSRSSSPS SSNSPRSVGS DSPIRSDKKK PKSNSKEETR SPNTKKHVSA KGKEASLEVH SSSPGKSNSS SSGSEAKKPI TETPATSDVK
0101: EESPASVSPI MASSLGLNRI KTRSGPLPQE SFFSFENDYA IPVLPCYKLS KLDTGKKEAG SSKVDIGPLR SSNPALLASG TGQFKVSPTI SGPEGSAEVC
0201: TPENSYDLDD PKESDSPRYQ ALLRMTSAPR KRFPGDIKSF SHELNSKGVR PFPLWKPRRL NNLEDILNLI RTKFDKAKEE VNSDLFAFGG DLLDIYDKNK
0301: ESHPELLVTI EDLLVLAKTC AKTTSKEFWL QCEGIVQDLD DRRQELPPGV LKQLHTRMLF ILTRCTRLLQ FHKESWGQEE DAVQLRQSGV LHSADKRDPT
0401: GEVRDGKGSS TANALKVPST KKAYSQEQRG LNWIEGFFVR PAPLSSPYNE TSKDSESPAN IDKMSSWKRL PSPASKGVQE AAVSKEQNDR KVEPPQVVKK
0501: LVAISDDMAV AKLPEVSSAK ASQEHMSKNR HNISWGYWGH QSCISEESSI ICRICEEEIP TTHVEDHSRI CALADKYDQK GVGVDERLMA VAVTLEKITD
0601: NVIQKDSLAA VESPEGMKIS NASLTEELDV LSPKLSDWSR RGSEDMLDCF PETDNSVFMD DMGCLPSMSC RTRFGPKSDQ GMATSSAGSM TPRSPIPTPR
0701: PDPIELLLEG KGTFHDQDDF PQMSELADIA RCAANAIPVD DQSIQLLLSC LEDLRVVIDR RKFDALIVET FGTRIEKLIQ EKYLQLCELM DDEKGTIIDE
0801: DAPLEDDVVR SLRTSPVHLR DRISIDDFEV MKSISRGAFG HVILARKNTT GDLFAIKVLR KADMIRKNAV ESILAERDIL INARNPFVVR FFYSFTCSEN
0901: LYLVMEYLNG GDFYSMLRKI GCLDEANARV YIAEVVLALE YLHSEGVVHR DLKPDNLLIA HDGHVKLTDF GLSKVGLINN TDDLSGPVSS ATSLLVEEKP
1001: KLPTLDHKRS AVGTPDYLAP EILLGTGHGA TADWWSVGII LYEFLVGIPP FNADHPQQIF DNILNRNIQW PPVPEDMSHE ARDLIDRLLT EDPHQRLGAR
1101: GAAEVKQHSF FKDIDWNTLA QQKAAFVPDS ENAFDTSYFQ SRYSWNYSGE RCFPTNENED SSEGDSLCGS SGRLSNHHDE GVDIPCGPAE FETSVSENYP
1201: FDNFSFKNLS QLAYINYNLM SKGHKDETQP SLQRR
Arabidopsis Description
Protein kinase superfamily protein [Source:TAIR;Acc:AT1G48490]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.