CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G17850.1	EER91265	AT4G26630.1	25387881
AT3G17850.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033726_P002	Maize	cytosol, plastid	93.26	92.96
Os03t0711800-01	Rice	plasma membrane	89.06	88.63
TraesCS4B01G046600.2	Wheat	plastid	86.04	86.39
TraesCS4D01G045500.2	Wheat	plastid	85.8	86.35
TraesCS4A01G267800.1	Wheat	plastid	85.49	86.03
GSMUA_Achr10P...	Banana	cytosol	45.44	82.21
HORVU4Hr1G007540.1	Barley	cytosol	85.17	81.67
GSMUA_Achr2P15970_001	Banana	cytosol	18.79	77.2
CDY67568	Canola	cytosol	30.37	74.22
GSMUA_Achr7P10290_001	Banana	cytosol, plastid	67.72	69.32
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	66.22	63.94
GSMUA_Achr2P15960_001	Banana	cytosol	49.64	63.42
KRH48660	Soybean	cytosol, plastid	64.08	62.3
CDY41826	Canola	cytosol	38.06	62.02
Solyc06g068920.2.1	Tomato	cytosol, plastid	62.89	62.0
KRH39042	Soybean	cytosol, plastid	63.84	61.83
Solyc03g118530.2.1	Tomato	cytosol, plastid	63.28	61.67
CDY61286	Canola	cytosol, plastid	58.37	59.93
AT3G17850.1	Thale cress	cytosol, plastid	60.11	58.49
Bra021278.1-P	Field mustard	cytosol, plastid	58.13	58.36
CDX95815	Canola	plastid	58.6	57.92
Bra022251.1-P	Field mustard	plastid	58.6	57.69
CDX92168	Canola	plastid	58.6	57.6
AT1G48490.4	Thale cress	plastid	55.27	56.39
CDX77308	Canola	cytosol, plastid	52.82	54.95
Bra014141.1-P	Field mustard	cytosol, plastid	52.18	54.25
CDX93672	Canola	cytosol, mitochondrion	39.65	53.76
Bra018730.1-P	Field mustard	cytosol, mitochondrion	39.49	53.72
CDY49673	Canola	cytosol	41.24	52.79
GSMUA_Achr10P...	Banana	nucleus	19.67	51.45
PGSC0003DMT400074066	Potato	nucleus, plastid	31.32	50.84
EES16404	Sorghum	cytosol	38.38	44.2
KXG39433	Sorghum	cytosol	12.13	31.48
EES18485	Sorghum	cytosol	13.88	31.47
KXG38339	Sorghum	cytosol	13.72	31.45
EER97738	Sorghum	cytosol	11.97	31.07
OQU79568	Sorghum	nucleus	14.12	30.96
EES00154	Sorghum	cytosol	13.4	30.78
KXG21484	Sorghum	cytosol	13.32	30.77
EES03961	Sorghum	cytosol	10.47	26.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.1	Gene3D:3.30.200.20	UniProt:A0A1Z5S598	InterPro:AGC-kinase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf
EnsemblPlants:OQU91111	ProteinID:OQU91111	ProteinID:OQU91111.1	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF155	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G117200
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B423CBA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:9127798..9138377

Molecular Weight (calculated)

138643.0 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.566

Length

1261 amino acids

Sequence
(BLAST)

0001: MVFKGRFFSS RHKSSESSSS PDGSNSPRTP TSAPASASAA SPASSSSSRS DKKKTKSETP KKRDKLFGSA ATAPKSAASS ASSSPAGDGR KGSVPHHRDA
0101: GGGGGGGASA AALSPILASS LGLNRIKTRS GPLPQEGQRM AAALGSSNLS RGQGQAEPSA ASAGVGGRKG VSSWADTSSS SRGKGKTTEL PTRSAAGTSL
0201: GAGGKSTVKA KPSAQRNHSG DLRTPTHIPE AACAYDPCET PKESESPRFK AIMQATSAPR KRHPADIKSF SHELNSKGVR PFPFWKPRGI YNLKEVIKVI
0301: QVRFEKAKEE VNSDLAVFAG DLVSVMEKYA DSHPEWKETL EDLLILARTC CVMTPGEFWL QCEGIVQDLD DHRQELSMGV LKKLYTRMLF ILTRCTRLLQ
0401: FHKESGFAED EVVIDQRDKI IQSADRRILT PPGADDTTSR ASKSDARKSY SQEQHNLKWK RSQEIKPVKL LPPLDTDVKK EPDSPTKERI SSWKPFPSPV
0501: TKVPKESTPT KLESPNKKTD AHSTVSSHVE LSSPVESLPQ QQLPVKHQHK TSWGHWSDQP NISEEGSIMC RICEEYVPTH YVEDHSRVCA IADRCDQKGV
0601: SVDERLIRVA EMLEKMVESY SPKDLPNAAV SPDVAKVSSS SINEESDGPS PKLSDWSRRG SADMLDYLQE ADNTISLDDI KNLPSMTCKT RFGPKSDHGM
0701: ATSSAGSMTP RSPLTTPRSN HIDMLLAGKN AINESDDLPQ IVELADIARC IANTPLDEES ALSQMVTCIE DLQEIVNRRK HEALTVQTFG TRIEKLHREK
0801: YLQLCDSVDM DKVDSASTIM DEEDDVVRSL RASPVHPVKD RTSIDDFEIM KPISRGAFGR VFLAKKRTTG DLFAIKVLRK ADMIRKNAVE SILAERDILI
0901: TVRNPFVVRF FYSFTSRENL YLVMEYLNGG DLYSLLRNLG CLDEDVARVY LAEVVLALEY LHSMHIVHRD LKPDNLLIAH DGHIKLTDFG LSKVGLINST
1001: DDLSGPAVSG ASLYGDDEPQ MNELEQMDHR ARRQNRSAVG TPDYLAPEIL LGTGHGCSAD WWSVGVILFE LIVGIPPFNA EHPQTIFDNI LNRKIPWPHV
1101: PEEMSFDAQD LIDKLLTEDP HQRLGANGAS EVKQHPFFKD ISWDTLARQK AAFVPSSDSA SDTSYFTSRY SWNPSDENIY EAYEFEDSSD NGSLSGSSSC
1201: VSNRQDDMGE DSGGLNEFES SANVNYSFSN FSFKNLSQLA SINYDLLTKG LKDDQPPRTE T

Best Arabidopsis Sequence Match ( AT3G17850.1 )
(BLAST)

0001: MVFKNKLFFS SKKSGSSSPD SSNSPRSVGS NSPIRSDKKK SKSASKDEPP IPIPGFVGVG CKQTQIKDGL KKKDGSSKGK QLSSEVQAHS IGKSNLSPSS
0101: EVKKPPPPEV KEGPAFVSPI MASSLGLNRI KTRSGPLPQE RVFNYRNDPA TSNLSKMGAD GGDLGSGSAT SGSGSGNRKK EAGSSKLGLE ENMDRTRPSD
0201: NKSDRDSLSP DTGPPRSLSP TLPPSGSRLQ NVASSSGTGR SEMSSGRSGP LRNSDFCTPE NSYEWENPKE SESPRYQALL RMTSAPRKRF PGDIKSFSHE
0301: LNSKGVRPFP LWKPRRSNNV EEVLNLIRAK FEKAKEEVNS DLAVFAADLV GVLEKNAESH PEWEETFEDL LILARSCAMT TPGDFWLQCE GIVQDLDDRR
0401: QELPPGVLKQ LHTRMLFILT RCTRLLQFHK ESWGEEEQVV QLRQSRVLHS IEKIPPSGAG RSYSAAKVPS TKKAYSQEQH GLDWKEDAVV RSVPPLAPPE
0501: NYAIKESESP ANIDRMSSWK KLPSPALKTV KEAPASEEQN DSKVEPPNIV GSRQGRDDAA VAILNFPPAK DSHEHSSKHR HNISWGYWGE QPLISEESSI
0601: MCRICEEEVP TTHVEDHSRV CTLADKYDQK GLSVDERLMA VAGTLDKIAE TFRHKDSLAA AESPDGMKVS NSHLTEESDV LSPRLSDWSR KGSEDMLDCF
0701: PEADNSIFMD DLRGLPLMSC RTRFGPKSDQ GMTTSSASSM TPRSPIPTPR PDPIEQILGG KGTFHDQDDI PQMSELADIA KCAADAIPGD DQSIPFLLSC
0801: LEDLRVVIDR RKFDALTVET FGTRIEKLIR EKYVHMCELM DDEKVDLLST VIDEDAPLED DVVRSLRTSP VHPRDRTSID DFEIIKPISR GAFGRVFLAK
0901: KRTTGDLFAI KVLKKADMIR KNAVESILAE RDILINVRNP FVVRFFYSFT CRDNLYLVME YLNGGDLYSL LRNLGCLEED IVRVYIAEVV LALEYLHSEG
1001: VVHRDLKPDN LLIAHDGHIK LTDFGLSKVG LINSTDDLAG PAVSGTSLLD EEESRLAASE EQLERRKKRS AVGTPDYLAP EILLGTGHGA TADWWSVGII
1101: LFELIVGIPP FNAEHPQQIF DNILNRKIPW PHVPEEMSAE AHDIIDRFLT EDPHQRLGAR GAAEVKQHIF FKDINWDTLA RQKAAFVPAS ESAIDTSYFR
1201: SRYSWNTSDE QFFPSGEVPD YSDADSMTNS SGCSSNHHEE GEAEECEGHA EFESGIPVDY SFSNFSFKNL SQLASINYDL LSKGWKDEPQ QIPHHK

Arabidopsis Description

IREH1Probable serine/threonine protein kinase IREH1 [Source:UniProtKB/Swiss-Prot;Acc:F4J6F6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.