CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46196	Canola	cytosol	99.42	99.42
Bra031468.1-P	Field mustard	cytosol	98.08	97.71
CDY56408	Canola	cytosol	97.89	96.41
AT5G09890.2	Thale cress	cytosol	92.51	93.41
Solyc12g088820.1.1	Tomato	cytosol	75.43	78.92
PGSC0003DMT400039856	Potato	cytosol	75.62	78.8
KRH05680	Soybean	cytosol	77.74	77.14
KRH15363	Soybean	cytosol	76.97	76.67
VIT_18s0001g10470.t01	Wine grape	cytosol	76.58	76.0
PGSC0003DMT400020578	Potato	cytosol	76.78	75.9
Solyc04g078870.2.1	Tomato	cytosol	76.58	75.57
CDX68937	Canola	cytosol	56.24	56.45
CDY65082	Canola	cytosol	52.02	56.34
CDY49415	Canola	cytosol	59.5	56.26
CDX77529	Canola	cytosol	59.31	56.08
CDX85087	Canola	cytosol	59.31	56.08
CDY12763	Canola	cytosol	59.31	56.08
CDY69024	Canola	cytosol	51.44	55.95
CDX75322	Canola	endoplasmic reticulum	55.28	55.49
CDY67156	Canola	cytosol	50.29	55.16
CDY67274	Canola	cytosol	52.59	51.99
CDX89854	Canola	cytosol	33.78	51.92
CDY65084	Canola	cytosol	54.89	51.81
CDY02314	Canola	cytosol	55.47	51.42
CDY09553	Canola	cytosol, plastid	55.28	51.25
CDY31963	Canola	cytosol	54.89	49.65
CDX90255	Canola	cytosol	59.69	49.29
CDY12061	Canola	cytosol	56.62	46.31
CDY70020	Canola	cytosol	18.81	44.34
CDY09005	Canola	cytosol	37.81	42.0
CDY58648	Canola	cytosol	24.76	30.42
CDY27982	Canola	cytosol, mitochondrion	25.72	29.13
CDY36001	Canola	cytosol, mitochondrion	25.53	28.79
CDY27983	Canola	cytosol	24.95	28.57
CDY36000	Canola	cytosol	24.76	28.54
CDY22166	Canola	cytosol	24.18	28.44
CDY22167	Canola	cytosol	24.95	28.26
CDY58649	Canola	cytosol	24.76	28.17
CDY67568	Canola	cytosol	27.83	28.1
CDY68313	Canola	cytosol	24.57	27.71
CDY30714	Canola	cytosol	27.06	27.65
CDY08594	Canola	cytosol	24.76	26.82
CDY41359	Canola	cytosol	24.76	26.49
CDY00952	Canola	cytosol	24.38	26.29
CDY44862	Canola	cytosol	24.18	25.77
CDX70218	Canola	cytosol	24.18	25.71
CDY05763	Canola	cytosol	54.89	24.7
CDY41826	Canola	cytosol	30.71	20.67
CDX93672	Canola	cytosol, mitochondrion	30.71	17.2
CDY49673	Canola	cytosol	31.09	16.45
CDY17064	Canola	cytosol	31.29	15.42
CDY43221	Canola	cytosol	31.09	15.31
CDX86906	Canola	cytosol	30.9	14.39
CDY00276	Canola	cytosol	30.9	14.39
CDX77308	Canola	cytosol, plastid	33.21	14.27
CDY61286	Canola	cytosol, plastid	31.29	13.27
CDX92168	Canola	plastid	31.09	12.63
CDX95815	Canola	plastid	30.71	12.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.4	Gene3D:3.30.200.20	GO:A0A078EP74	InterPro:AGC-kinase_C	EnsemblPlants:CDY03775
ProteinID:CDY03775	ProteinID:CDY03775.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00117153001	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00433
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF195
InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF400A	SEG:seg	:	:	:

Description

BnaC01g28920D

Coordinates

chrLK031946:-:160034..163476

Molecular Weight (calculated)

59809.5 Da

IEP (calculated)

5.487

GRAVY (calculated)

-0.598

Length

521 amino acids

Sequence
(BLAST)

001: MEGGADGTVR VGGLNSKPGR GVELESDSTV SSPVTRQKAA AAKQFIENHY KNYLQGLHER MERRREFQRK VQEAQLPVEE QDEMMRNLAR RETEYMRLQR
101: RKIGIDDFEL LTVIGKGAFG EVRLCRLRST GEVYAMKKLK KTDMLSRGQV EHVRSERNLL AEVDSRYIVK LFYSFQDSEC LYLIMEYLPG GDIMTLLMRE
201: DILAEDVARF YIAESILAIH SIHHHNYVHR DIKPDNLILD KSGHLKLSDF GLCKPLDEKY SSLLLEDEEM LSQEAESQSG KSDSDKAPWQ MPKEQLLQWK
301: RNRRALAYST VGTLDYMAPE VLLKKGYGME CDWWSLGAIL YEMLVGYPPF CSDDPRITCR KIINWRVCLK FPEEPKISDE ARDLICRLLC DVESRLGTRG
401: AEEIKTHPWF NGTQWDKLYE MEAAYRPTVD GELDTQNFEK FPEVEGSASE APQVGPWRKM LTSKDNNFIG FTFKKSDITR SMENTGTDMK PNGSGDAPSL
501: ISLLGRINME EAETGELNQK T

Best Arabidopsis Sequence Match ( AT5G09890.1 )
(BLAST)

001: MDGADGTVRV KPGRGFETET DVAVSSPVTR QKAAAAKQFI ENHYKNYLQG LHERMERRRE FQRKVQEAQL PVEEQDEMMR NLARRETEYM RLQRRKIGID
101: DFELLTVIGK GAFGEVRLCR LRSTSEVYAM KKLKKTEMLS RGQVEHVRSE RNLLAEVDSR YIVKLFYSFQ DSECLYLIME YLPGGDIMTL LMREDILSED
201: VARFYIAESI LAIHSIHQHN YVHRDIKPDN LILDKSGHLK LSDFGLCKPL DDKYSSLLLE DDEMLSQDSE NQSGKSDADK APWQMPKEQL LQWKRNRRAL
301: AYSTVGTLDY MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSDDPR ITCRKIINWR VCLKFPEEPK ISDEARDLIC RLLCDVDSRL GTRGVEEIKS
401: HPWFKGTPWD KLYDMEAAYR PIVDGELDTQ NFEKFPEVEG SPSEAPQVGP WRKMLTSKDT NFIGFTFKKS DITRSMESSG ADMKSNGSGE APSLISLLGR
501: INMEEGEGGE LNHKT

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.