Factsheet for Solyc12g088820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039856	Potato	cytosol	97.19	96.8
Solyc04g078870.2.1	Tomato	cytosol	87.35	82.39
VIT_18s0001g10470.t01	Wine grape	cytosol	81.53	77.33
Bra040471.1-P	Field mustard	cytosol	63.25	77.21
KRH15363	Soybean	cytosol	80.92	77.06
KRH05680	Soybean	cytosol	81.12	76.95
AT5G09890.2	Thale cress	cytosol	79.32	76.55
CDY03775	Canola	cytosol	78.92	75.43
CDY46196	Canola	cytosol	78.92	75.43
Bra031468.1-P	Field mustard	cytosol	78.92	75.14
CDY56408	Canola	cytosol	79.72	75.05
Solyc06g008330.1.1	Tomato	cytosol	58.84	57.12
Solyc08g062670.2.1	Tomato	cytosol	58.63	56.15
Solyc09g090200.2.1	Tomato	nucleus	61.45	55.94
Solyc09g066460.2.1	Tomato	cytosol	60.04	55.58
Solyc12g009010.1.1	Tomato	cytosol	56.43	55.21
Solyc06g071210.2.1	Tomato	nucleus	27.91	29.83
Solyc03g095510.2.1	Tomato	cytosol	26.51	28.51
Solyc10g074930.1.1	Tomato	cytosol, plastid	26.1	27.37
Solyc03g071750.2.1	Tomato	cytosol	26.31	27.12
Solyc11g007760.1.1	Tomato	cytosol	25.9	26.11
Solyc04g080170.2.1	Tomato	cytosol	31.73	14.59
Solyc03g083590.2.1	Tomato	cytosol	32.33	13.8
Solyc03g118530.2.1	Tomato	cytosol, plastid	32.93	12.67
Solyc06g068920.2.1	Tomato	cytosol, plastid	31.93	12.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.4	Gene3D:3.30.200.20	InterPro:AGC-kinase_C	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	UniProt:K4DGV3
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF195	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g088820.1	EnsemblPlants:Solyc12g088820.1.1
UniParc:UPI0002769461	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:64044391..64048226

Molecular Weight (calculated)

57242.5 Da

IEP (calculated)

6.278

GRAVY (calculated)

-0.543

Length

498 amino acids

Sequence
(BLAST)

001: MEGADQVFNS LEPEFSVSSP VTRQKSAAAK KIIENHYKNY LQGLQDRKER RRTLQRKAQE AQIPDDEQEK MLRNLEKRET EFMRLQRHKV GIDDFELLTV
101: IGKGAFGEVR LCRFKSTGDV FAMKKLKKSE MLSRGQVEHV RSERNLLVEV DSRCIVKLFY SFQDSDFLYL IMEYLPGGDI MTLLMREDIL SEDVAQFYMA
201: ESILAIHSIH QHNYVHRDIK PDNLILDKNG HLKLSDFGLC KPLESKYSSL LEDEDLTSQK SLTETADSDR APWLMPKEQL QEWKRNRRAL AYSTVGTLDY
301: MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSEDPR LTCRKIINWR ACLKFPEEPK VSDEAKDLIC RLLCDVESRL GTRGVEEIKA HPWFEGTKWD
401: ALYEMEAAYK PIVTGELDTQ NFEKFPEVEG TQSTTPRVGP WRKMLTSKDA NFIGYTYKKS DILKSAGTSG IDASSNGSKP PPSLVSLFGR VDLQDTTK

Best Arabidopsis Sequence Match ( AT5G09890.1 )
(BLAST)

001: MDGADGTVRV KPGRGFETET DVAVSSPVTR QKAAAAKQFI ENHYKNYLQG LHERMERRRE FQRKVQEAQL PVEEQDEMMR NLARRETEYM RLQRRKIGID
101: DFELLTVIGK GAFGEVRLCR LRSTSEVYAM KKLKKTEMLS RGQVEHVRSE RNLLAEVDSR YIVKLFYSFQ DSECLYLIME YLPGGDIMTL LMREDILSED
201: VARFYIAESI LAIHSIHQHN YVHRDIKPDN LILDKSGHLK LSDFGLCKPL DDKYSSLLLE DDEMLSQDSE NQSGKSDADK APWQMPKEQL LQWKRNRRAL
301: AYSTVGTLDY MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSDDPR ITCRKIINWR VCLKFPEEPK ISDEARDLIC RLLCDVDSRL GTRGVEEIKS
401: HPWFKGTPWD KLYDMEAAYR PIVDGELDTQ NFEKFPEVEG SPSEAPQVGP WRKMLTSKDT NFIGFTFKKS DITRSMESSG ADMKSNGSGE APSLISLLGR
501: INMEEGEGGE LNHKT

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.