CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	CDX70218	AT5G04510.1	16973627
AT1G53700.1	CDY44862	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67737	Canola	nucleus	98.37	98.17
AT1G53700.1	Thale cress	cytosol	86.97	89.71
CDX97569	Canola	nucleus	73.93	75.78
CDX98447	Canola	nucleus	73.12	75.74
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	65.17	67.51
Solyc07g056400.1.1	Tomato	nucleus	63.14	64.18
KRH43840	Soybean	cytosol	60.29	64.07
PGSC0003DMT400079838	Potato	nucleus	62.73	64.03
KRH13630	Soybean	nucleus	62.12	63.81
GSMUA_Achr4P18040_001	Banana	cytosol	42.97	46.78
GSMUA_Achr4P21830_001	Banana	cytosol	42.16	46.62
TraesCS4D01G222200.1	Wheat	nucleus	42.97	40.73
TraesCS4B01G221800.1	Wheat	nucleus	42.77	40.62
TraesCS4A01G082200.1	Wheat	nucleus	42.36	40.08
Os03t0253200-01	Rice	nucleus	40.94	39.57
CDY43662	Canola	cytosol	35.03	39.18
CDY17273	Canola	cytosol	35.03	39.18
CDX84294	Canola	cytosol, plastid	35.03	39.18
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	41.55	38.86
EER95166	Sorghum	nucleus	40.94	38.29
CDY08710	Canola	cytosol, plastid	34.22	38.1
Zm00001d028447_P001	Maize	nucleus	40.53	37.62
CDY48186	Canola	cytosol	37.07	37.3
CDY20744	Canola	cytosol, plastid	36.25	36.93
CDY06552	Canola	cytosol, plastid	36.25	36.78
CDX74407	Canola	cytosol, plastid	35.64	36.61
CDY11972	Canola	cytosol, plastid	36.25	36.18
CDY36769	Canola	cytosol, plastid	36.05	35.98
CDY30287	Canola	cytosol, plastid	36.05	35.26
CDY17366	Canola	cytosol, plastid	35.85	35.2
CDY28629	Canola	cytosol, plastid	35.85	35.2
CDY33329	Canola	cytosol	34.83	35.11
CDY17708	Canola	cytosol	38.9	34.48
CDX89320	Canola	cytosol	35.64	34.11
CDX94306	Canola	cytosol	35.64	34.11
CDX74691	Canola	cytosol	38.29	33.75
CDY35093	Canola	cytosol	35.03	33.73
CDX77795	Canola	cytosol	38.9	33.45
CDY56474	Canola	cytosol	38.29	32.87
CDX83710	Canola	cytosol, plastid	36.05	32.24
CDY13725	Canola	plastid	35.85	30.56
CDY42166	Canola	cytosol, plastid	35.23	30.4
CDY08414	Canola	cytosol, plastid	35.23	30.3
CDY30488	Canola	cytosol	38.09	30.26
CDY50542	Canola	cytosol	35.23	30.24
CDY23458	Canola	cytosol	37.88	28.79
CDY13336	Canola	cytosol, plastid	35.64	25.14
CDX75049	Canola	cytosol	33.6	22.82
CDX67542	Canola	cytosol	36.46	22.29
CDX84133	Canola	cytosol	33.4	21.33
CDX77055	Canola	cytosol	36.86	21.07
CDX76251	Canola	cytosol	34.22	20.41
CDX70297	Canola	cytosol	35.44	19.84
CDY10368	Canola	cytosol	35.64	19.36
CDX78131	Canola	cytosol	37.07	18.02
CDX73596	Canola	cytosol	36.86	18.01
CDY33330	Canola	cytosol, mitochondrion, nucleus	5.5	16.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078GZR3	UniProt:A0A078GZR3	EnsemblPlants:CDY30659
ProteinID:CDY30659	ProteinID:CDY30659.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00045974001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE72AD
SEG:seg	:	:	:	:	:

Description

BnaC06g10230DBnaC06g10230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZR3]

Coordinates

chrLK032257:+:209646..211121

Molecular Weight (calculated)

55422.3 Da

IEP (calculated)

9.865

GRAVY (calculated)

-0.358

Length

491 amino acids

Sequence
(BLAST)

001: MEDEGYYLET DLDFSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSAA ATTLHHRRQD PHWTAIRAAT TLSSDGRLHL RHLKLVRLLG
101: TGNLGRVFLC HLRDCPTPTA FALKVIDRDA LTAKKLSHVQ TEAEILSMLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPGNR LPVSSVRFFA
201: SEVLVALEYL HALGIVYRDL KPENILIRED GHIVLSDFDL CFKADVVPTF RSRRFPRVST PPSSPRRLRR SRRGGCFSTE VEYEREEIVA EFAAEPVTAF
301: SKSCVGTHEY LAPELVAGNG HGSGVDWWAF GIFLYEMLHG TTPFKGVTKE QTLRKIASSD DVAFPLELEE EGIREAKDLI QKLLVKDPMK RLGCARGAQD
401: IKRHPFFEGI KWPLIRNYKP PEIRGLVKKS TKAHACHVTG VSSPRRRKWL WWALSNLLRS KSLKGSNSKI QSNNNYYHYV GKSYNASRKR V

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.