CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	KRG92082	AT5G04510.1	16973627
AT1G53700.1	KRH34704	AT5G04510.1	16973627
AT3G14370.1	KRG92082	AT5G04510.1	16973627
AT3G14370.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13630	Soybean	nucleus	86.15	83.26
Solyc07g056400.1.1	Tomato	nucleus	68.4	65.42
PGSC0003DMT400079838	Potato	nucleus	67.97	65.28
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	66.02	64.35
CDX98447	Canola	nucleus	64.94	63.29
AT1G53700.1	Thale cress	cytosol	64.94	63.03
AT3G14370.1	Thale cress	nucleus	65.37	62.92
CDX97569	Canola	nucleus	64.94	62.63
Bra027344.1-P	Field mustard	nucleus	64.94	62.63
CDY67737	Canola	nucleus	64.29	60.37
Bra041025.1-P	Field mustard	nucleus	64.29	60.37
CDY30659	Canola	nucleus	64.07	60.29
GSMUA_Achr4P18040_001	Banana	cytosol	47.19	48.34
GSMUA_Achr4P21830_001	Banana	cytosol	46.32	48.2
Os03t0253200-01	Rice	nucleus	46.75	42.52
TraesCS4D01G222200.1	Wheat	nucleus	46.75	41.7
TraesCS4B01G221800.1	Wheat	nucleus	46.54	41.59
KRH34744	Soybean	cytosol	37.01	41.3
KRH59216	Soybean	cytosol	41.13	41.3
KRG92038	Soybean	cytosol	37.66	41.23
KRH63005	Soybean	nucleus	43.51	41.19
EER95166	Sorghum	nucleus	46.75	41.14
TraesCS4A01G082200.1	Wheat	nucleus	46.1	41.04
KRH26592	Soybean	nucleus	40.04	40.84
KRH21098	Soybean	cytosol, plastid	39.83	40.71
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	46.1	40.57
Zm00001d028447_P001	Maize	nucleus	46.1	40.26
KRH56632	Soybean	plastid	42.21	39.96
KRH30493	Soybean	cytosol, plastid	37.88	39.68
KRH25188	Soybean	nucleus, plastid	37.45	39.68
KRH03726	Soybean	plastid	41.77	39.39
KRH22717	Soybean	nucleus	40.04	37.22
KRH36626	Soybean	cytosol	43.72	33.22
KRH11623	Soybean	cytosol	41.99	32.83
KRH13830	Soybean	cytosol	40.69	32.64
KRH43612	Soybean	cytosol	40.48	31.91
KRH44814	Soybean	cytosol	38.53	31.79
KRG93211	Soybean	cytosol	41.99	31.7
KRH07149	Soybean	cytosol	41.77	30.59
KRG94078	Soybean	cytosol, plastid	41.77	30.59
KRH48818	Soybean	cytosol	45.24	27.39
KRH40174	Soybean	cytosol	45.24	27.28
KRH66511	Soybean	nucleus	44.81	27.13
KRH01064	Soybean	cytosol	45.02	27.08
KRH62499	Soybean	cytosol	41.34	23.1
KRH56412	Soybean	cytosol	41.13	22.75
KRH32674	Soybean	cytosol	42.42	22.71
KRH30833	Soybean	cytosol	42.42	22.63
KRG96169	Soybean	cytosol	42.21	22.47
KRH67882	Soybean	cytosol	41.99	22.27
KRH23770	Soybean	cytosol	38.1	21.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02004898	EnsemblPlantsGene:GLYMA_08G174400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
UniProt:I1KU78	InterPro:IPR000719	EnsemblPlants:KRH43840	ProteinID:KRH43840	ProteinID:KRH43840.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294AD6E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:13932132..13937378

Molecular Weight (calculated)

51877.2 Da

IEP (calculated)

9.372

GRAVY (calculated)

-0.278

Length

462 amino acids

Sequence
(BLAST)

001: MEEPTLLFPD TDLDLSFTST TTDRTTTTTT TSARTSLART SSLTLSFNDR LSTFSASETT TASLISRRPH RSGDPNWSAI QAAVNLSSDG RLHLRHLKLL
101: RHLGSGNLGR VFLCRLRDYD GAHFALKVVD KDLLTPKKLS HAQTEAEILH ALDHPFLPTL YARIDVSHYT CLLMDFCPGG DLHSLLRKQP QFRLPLAAAR
201: FFAAEVLVAL EYLHALGIVY RDLKPENVLL RDDGHVMLSD FDLCFKSDVA PNVNFRSHTS PPRVGPTSGC FSCNNNNRHR EKLVAEFVAE PVTAFSRSCV
301: GTHEYLAPEL VSVNGHGNGV DWWAFGVFVY ELLYGTTPFK GCSKEGTLRN IASSKDVRFV HVAEREEAGM AEARDLIEKL LVKDPRKRLG CAKGATEIKL
401: HPFFYGIKWP LIRTYRPPEV KGFIRRNKSN VTCKRNTCWW KRLGLLVRNK GGCRGYWGGR EV

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.