Factsheet for PGSC0003DMT400079838

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400043552
PGSC0003DMT400070360

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	PGSC0003DMT400043552	AT5G04510.1	16973627
AT1G53700.1	PGSC0003DMT400070360	AT5G04510.1	16973627
AT3G14370.1	PGSC0003DMT400043552	AT5G04510.1	16973627
AT3G14370.1	PGSC0003DMT400070360	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056400.1.1	Tomato	nucleus	97.09	96.69
KRH43840	Soybean	cytosol	65.28	67.97
KRH13630	Soybean	nucleus	67.15	67.57
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	65.07	66.03
AT1G53700.1	Thale cress	cytosol	62.37	63.03
Bra041025.1-P	Field mustard	nucleus	64.24	62.8
CDY67737	Canola	nucleus	64.24	62.8
CDY30659	Canola	nucleus	64.03	62.73
CDX98447	Canola	nucleus	61.54	62.45
AT3G14370.1	Thale cress	nucleus	62.16	62.29
Bra027344.1-P	Field mustard	nucleus	61.95	62.21
CDX97569	Canola	nucleus	61.95	62.21
GSMUA_Achr4P21830_001	Banana	cytosol	44.28	47.97
GSMUA_Achr4P18040_001	Banana	cytosol	44.28	47.23
Os03t0253200-01	Rice	nucleus	42.83	40.55
TraesCS4D01G222200.1	Wheat	nucleus	43.45	40.35
TraesCS4B01G221800.1	Wheat	nucleus	43.24	40.23
TraesCS4A01G082200.1	Wheat	nucleus	43.04	39.88
PGSC0003DMT400025008	Potato	cytosol	37.21	39.78
PGSC0003DMT400053292	Potato	cytosol, plastid	38.25	39.66
EER95166	Sorghum	nucleus	43.04	39.43
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	42.83	39.24
Zm00001d028447_P001	Maize	nucleus	42.41	38.56
PGSC0003DMT400068252	Potato	nucleus	36.59	37.21
PGSC0003DMT400050201	Potato	cytosol	34.3	35.79
PGSC0003DMT400003557	Potato	cytosol, plastid	38.25	35.38
PGSC0003DMT400050818	Potato	cytosol	41.79	33.11
PGSC0003DMT400057021	Potato	plastid	41.37	32.95
PGSC0003DMT400022397	Potato	plastid	40.54	31.81
PGSC0003DMT400032816	Potato	cytosol	40.75	31.06
PGSC0003DMT400067034	Potato	cytosol	42.0	28.86
PGSC0003DMT400017808	Potato	cytosol, plastid	39.5	28.53
PGSC0003DMT400068494	Potato	cytosol	40.96	28.02
PGSC0003DMT400068291	Potato	cytosol	39.71	22.79
PGSC0003DMT400018337	Potato	cytosol	38.88	21.92
PGSC0003DMT400006862	Potato	cytosol	41.16	19.41
PGSC0003DMT400072395	Potato	nucleus	39.29	18.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102578527	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D2J0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400031090	PGSC:PGSC0003DMG400031090
EnsemblPlants:PGSC0003DMT400079838	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294F650	RefSeq:XP_006366774.1	SEG:seg

Description

PsPK3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031090]

Coordinates

chr7:+:51599400..51601169

Molecular Weight (calculated)

54739.4 Da

IEP (calculated)

9.619

GRAVY (calculated)

-0.447

Length

481 amino acids

Sequence
(BLAST)

001: MEELDALYPP DSDLDLSFTS CASITTTTTD RTLSARSSLA RSSLTLSFND RLSCTSSTNN PSAEIPNFHR RAHRQHDPNW SAIKAVTTLS SDGALHLRHL
101: KLHRLVGSGN LGRVFLCRLR DYDHANFALK VIDRDSLTAK KLSHVQTEAE ILSSLDHPFL PTLYAHLEVS HYTCLLIDFC PNGDLHSLLR KQPRNRLPVE
201: SVRFYAAEVL IALEYLHSLG IVYRDLKPEN ILIREDGHIM LSDFDLCFKS EVSPKLDFTT RIREGSRRRN SCYGDRQREE TVTEFVSEPT SAFSRSCVGT
301: HEYLAPELIS GAGHGNGVDW WAFGVLLYEL LYGTTPFKGN SKESTLRNIA SSKGVKFYVD ETQGHEAELR DLIEKLLIKD PRRRLGCTRG ATDIKRHPFF
401: AGIKWPLIRT YRPPEVRGLT IKKTKSKAHV SHVTGLSSPR IRRRCLWKKL GYLMRIKGSK YNLNSNHNYY CHTNHKVRKC A

Best Arabidopsis Sequence Match ( AT3G14370.1 )
(BLAST)

001: MEQEDFYFPD TDLDLSFTST TTDRTFASSS ARTSLTLSFN DRLSTSSAVT TSSTSSSSVN HRRHDPHWSA IKSAKLLSSD GNIHLRHLKL IRHLGTGNLG
101: RVFLCNLRDS SARFALKVID RNCLTTEKKL SQVETEAEIL SLLDHPFLPT LYARIDESHY TCLLIDYAPN GDLHSLLRKQ PGNRLPIQPV RFFAAEVLVA
201: LEYLHAMGIV YRDLKPENVL LREDGHVMLS DFDLCFKSDV VPTFKSRRYR RSSSSPSLRR RRSGCFSVAA EKKYEREEIV SEFAAEPVTA FSRSCVGTHE
301: YLAPELVSGN GHGSGVDWWA FGIFLYELLY GTTPFKGESK EQTLRNIVST TKTASFHMDG DLDEARDLIE KLLVKDPRKR LGCARGAQDI KRHPFFDGIK
401: WPLIRHYKPP EEVRGLVIKK STRPHASHVI AVSPRRRKSF LWRALSYLLR GKSSSGGSKN QSNSNYYHYV GKSYASRKRV

Arabidopsis Description

WAG2WAG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VAK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.