Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26700.1 | CDX70218 | AT5G04510.1 | 16973627 |
| AT2G26700.1 | CDY44862 | AT5G04510.1 | 16973627 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48186 | Canola | cytosol | 56.23 | 98.98 |
| Bra034312.1-P | Field mustard | cytosol | 59.72 | 96.98 |
| AT2G26700.1 | Thale cress | cytosol, plastid | 53.2 | 87.05 |
| VIT_11s0016g04910.t01 | Wine grape | nucleus, plastid | 34.34 | 62.77 |
| Solyc12g006690.1.1 | Tomato | nucleus, plastid | 32.95 | 61.26 |
| PGSC0003DMT400053292 | Potato | cytosol, plastid | 33.06 | 61.21 |
| GSMUA_Achr10P... | Banana | nucleus | 28.75 | 60.1 |
| KRH56632 | Soybean | plastid | 33.29 | 58.61 |
| KRH03726 | Soybean | plastid | 33.41 | 58.57 |
| KRH63005 | Soybean | nucleus | 32.95 | 57.99 |
| GSMUA_Achr7P09970_001 | Banana | nucleus | 28.29 | 57.45 |
| EES00213 | Sorghum | cytosol, plastid | 32.01 | 55.67 |
| Zm00001d039654_P001 | Maize | cytosol | 31.66 | 54.62 |
| Os01t0174700-01 | Rice | cytosol | 31.08 | 54.16 |
| TraesCS3D01G129100.1 | Wheat | cytosol | 30.62 | 54.12 |
| TraesCS3A01G128200.1 | Wheat | cytosol | 30.5 | 54.02 |
| TraesCS3B01G147300.1 | Wheat | cytosol | 30.27 | 53.61 |
| HORVU3Hr1G024030.1 | Barley | cytosol | 30.38 | 49.34 |
| CDX84294 | Canola | cytosol, plastid | 23.86 | 46.7 |
| CDY17273 | Canola | cytosol | 23.75 | 46.47 |
| CDY43662 | Canola | cytosol | 23.4 | 45.79 |
| CDY20744 | Canola | cytosol, plastid | 24.8 | 44.19 |
| CDY06552 | Canola | cytosol, plastid | 24.8 | 44.01 |
| CDY11972 | Canola | cytosol, plastid | 24.68 | 43.09 |
| CDY36769 | Canola | cytosol, plastid | 24.56 | 42.89 |
| CDY08710 | Canola | cytosol, plastid | 21.77 | 42.4 |
| CDY17366 | Canola | cytosol, plastid | 24.56 | 42.2 |
| CDY28629 | Canola | cytosol, plastid | 24.56 | 42.2 |
| CDX74407 | Canola | cytosol, plastid | 23.05 | 41.42 |
| CDY33329 | Canola | cytosol | 23.28 | 41.07 |
| CDX89320 | Canola | cytosol | 23.98 | 40.16 |
| CDX94306 | Canola | cytosol | 23.86 | 39.96 |
| CDY30287 | Canola | cytosol, plastid | 23.17 | 39.64 |
| CDY35093 | Canola | cytosol | 23.28 | 39.22 |
| CDY17708 | Canola | cytosol | 25.15 | 38.99 |
| CDX77795 | Canola | cytosol | 25.15 | 37.83 |
| CDX98447 | Canola | nucleus | 20.61 | 37.34 |
| CDX97569 | Canola | nucleus | 20.72 | 37.16 |
| CDY30659 | Canola | nucleus | 21.07 | 36.86 |
| CDX74691 | Canola | cytosol | 23.86 | 36.8 |
| CDY67737 | Canola | nucleus | 21.07 | 36.79 |
| CDY56474 | Canola | cytosol | 23.86 | 35.84 |
| CDX83710 | Canola | cytosol, plastid | 22.7 | 35.52 |
| CDY42166 | Canola | cytosol, plastid | 22.58 | 34.09 |
| CDY08414 | Canola | cytosol, plastid | 22.58 | 33.98 |
| CDY50542 | Canola | cytosol | 22.58 | 33.92 |
| CDY13725 | Canola | plastid | 22.24 | 33.16 |
| CDY30488 | Canola | cytosol | 23.52 | 32.69 |
| CDY23458 | Canola | cytosol | 23.75 | 31.58 |
| CDY13336 | Canola | cytosol, plastid | 23.28 | 28.74 |
| CDX75049 | Canola | cytosol | 21.89 | 26.0 |
| CDX67542 | Canola | cytosol | 23.75 | 25.4 |
| CDX84133 | Canola | cytosol | 22.12 | 24.71 |
| CDX76251 | Canola | cytosol | 22.0 | 22.96 |
| CDX70297 | Canola | cytosol | 22.7 | 22.23 |
| CDY10368 | Canola | cytosol | 22.82 | 21.68 |
| CDX73596 | Canola | cytosol | 23.52 | 20.1 |
| CDX78131 | Canola | cytosol | 23.52 | 20.0 |
| CDY33330 | Canola | cytosol, mitochondrion, nucleus | 3.38 | 17.79 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:A0A078CJK9 | EnsemblPlants:CDX77055 | ProteinID:CDX77055 |
| ProteinID:CDX77055.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00127628001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF70 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE4D75 | SEG:seg | : |
Description
BnaC04g38500D
Coordinates
chrLK031809:+:758622..762768
Molecular Weight (calculated)
96796.0 Da
IEP (calculated)
8.755
GRAVY (calculated)
-0.424
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSTKSYKD HEPDYETSTA GPDSSRRTSW LSSSFTASPS CSSSISHLSN HHDLNTYNHQ SKPHKANQIA WEAMARLRRR CGRAVGLEHF RLLKRLGSGD
101: IGSVYLCQIR GSPEVAFYAM KVVDKEAVAV KKKLGRAEME KKILGMLDHP FCPTLYAAFE ASHYSFLVME YCSGGDLYTA RLRQQSKRFG ISSTRFYAAE
201: TLVALEYLHM MGIVYRDLKP ENVLIRGDGH VMLSDFDLSF KCNVVPQLLN HNDYDRQVHD YDDDDDDFSI CSTPSCTTTP LHPVISCFSP ASSRRRRRKN
301: VITTTIHETA ECTSGSVKSN DVSRTFSRQP SSCSRVSSGL RDLSGGCPSI FAEPINARSK SFVGTHEYLA PEVISAKQMF NFASSSISHP SNHHDLNTYN
401: HQSKPHKANQ IAWEAMARLR RRCGRAVGLE HFRLLKRLGS GDIGSVYLCQ IRGSPEVAFY AMKVVDKEAV AVKKKLGRAE MEKKILGMLD HPFCPTLYAA
501: FEASHYSFLV MEYCSGGDLY TARLRQQSKR FGISSTRFYA AETLVALEYL HMMGIVYRDL KPENVLIRGD GHVMLSDFDL SFKCNVVPQL LNHNDYDRQV
601: HDDDDDDDFS ICSTPSCTTT PLHPVISCFS PASSRRRRRK NVITTTIHET AECTSGSVKS NDVSRTFSRQ PSSCSRVSSG LRDLSGGCPS IFAEPINARS
701: KSFVGTHEYL APEVISGQGH GSAVDWWTFG VFMYEMIFGT TPFKGDNNEK TLVNILKAPL TFPKVIVNSQ KEYDNMVSAQ DLITKLLVKN PKKRLGSLKG
801: SIEIKRHDFF EGVNWALIRS IKPPWSDNRS VNYFLPPRFM MTRKERDEPY HVSNHFDYF
101: IGSVYLCQIR GSPEVAFYAM KVVDKEAVAV KKKLGRAEME KKILGMLDHP FCPTLYAAFE ASHYSFLVME YCSGGDLYTA RLRQQSKRFG ISSTRFYAAE
201: TLVALEYLHM MGIVYRDLKP ENVLIRGDGH VMLSDFDLSF KCNVVPQLLN HNDYDRQVHD YDDDDDDFSI CSTPSCTTTP LHPVISCFSP ASSRRRRRKN
301: VITTTIHETA ECTSGSVKSN DVSRTFSRQP SSCSRVSSGL RDLSGGCPSI FAEPINARSK SFVGTHEYLA PEVISAKQMF NFASSSISHP SNHHDLNTYN
401: HQSKPHKANQ IAWEAMARLR RRCGRAVGLE HFRLLKRLGS GDIGSVYLCQ IRGSPEVAFY AMKVVDKEAV AVKKKLGRAE MEKKILGMLD HPFCPTLYAA
501: FEASHYSFLV MEYCSGGDLY TARLRQQSKR FGISSTRFYA AETLVALEYL HMMGIVYRDL KPENVLIRGD GHVMLSDFDL SFKCNVVPQL LNHNDYDRQV
601: HDDDDDDDFS ICSTPSCTTT PLHPVISCFS PASSRRRRRK NVITTTIHET AECTSGSVKS NDVSRTFSRQ PSSCSRVSSG LRDLSGGCPS IFAEPINARS
701: KSFVGTHEYL APEVISGQGH GSAVDWWTFG VFMYEMIFGT TPFKGDNNEK TLVNILKAPL TFPKVIVNSQ KEYDNMVSAQ DLITKLLVKN PKKRLGSLKG
801: SIEIKRHDFF EGVNWALIRS IKPPWSDNRS VNYFLPPRFM MTRKERDEPY HVSNHFDYF
001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF
Arabidopsis Description
PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.