CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES03961

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26700.1	EES03961	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039654_P001	Maize	cytosol	91.5	90.76
Os01t0174700-01	Rice	cytosol	80.16	80.32
TraesCS3D01G129100.1	Wheat	cytosol	73.89	75.1
TraesCS3B01G147300.1	Wheat	cytosol	73.68	75.05
TraesCS3A01G128200.1	Wheat	cytosol	73.68	75.05
GSMUA_Achr10P...	Banana	nucleus	59.51	71.53
GSMUA_Achr7P09970_001	Banana	nucleus	60.73	70.92
HORVU3Hr1G024030.1	Barley	cytosol	73.89	69.0
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	62.35	65.53
PGSC0003DMT400053292	Potato	cytosol, plastid	58.1	61.85
Solyc12g006690.1.1	Tomato	nucleus, plastid	57.69	61.69
KRH56632	Soybean	plastid	60.73	61.48
KRH03726	Soybean	plastid	59.92	60.41
KRH63005	Soybean	nucleus	55.87	56.56
CDY48186	Canola	cytosol	55.67	56.35
AT2G26700.1	Thale cress	cytosol, plastid	56.48	53.14
Bra034312.1-P	Field mustard	cytosol	56.28	52.55
EER93759	Sorghum	plastid	43.93	45.4
OQU79615	Sorghum	cytosol, plastid	44.33	43.37
OQU85494	Sorghum	plastid	46.96	40.56
KXG35854	Sorghum	cytosol	46.56	39.86
OQU84819	Sorghum	cytosol	42.71	39.59
EES07987	Sorghum	nucleus, plastid	41.5	39.42
EES15458	Sorghum	cytosol	47.77	39.14
EER99999	Sorghum	cytosol, plastid	42.11	38.66
OQU77686	Sorghum	cytosol	43.72	38.3
KXG19822	Sorghum	cytosol, plastid	44.74	37.97
EER95166	Sorghum	nucleus	37.45	35.24
EER91921	Sorghum	cytosol	45.55	34.3
EES11209	Sorghum	cytosol	47.17	33.97
CDX77055	Canola	cytosol	55.67	32.01
EES17014	Sorghum	cytosol	44.13	27.59
OQU81510	Sorghum	cytosol	45.14	27.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.2.4.1.2	MapMan:18.4.6.5	Gene3D:3.30.200.20	EntrezGene:8056542	UniProt:C5XND2
EnsemblPlants:EES00213	ProteinID:EES00213	ProteinID:EES00213.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	GO:GO:0048825	InterPro:IPR000719	ProteinID:KXG31736.1	InterPro:Kinase-like_dom_sf
ProteinID:OQU86226.1	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF70
InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G048700	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84593
RefSeq:XP_002455093.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:4480389..4484359

Molecular Weight (calculated)

55047.7 Da

IEP (calculated)

9.387

GRAVY (calculated)

-0.468

Length

494 amino acids

Sequence
(BLAST)

001: MATIKEESDY DSSRSSLTAP GSRRSWISDI GSSSSVSVRS FGRGWDTPAA SCRHKPHKAN QAEWEAIRRV RATSGRVGLE HFRLVRRLGS GDLGNVYLCQ
101: LREPWSTGCL YAMKVVDKDA LAFRKKLRRA EVEREILRTL DHPFLPTLYA DFEASHYACL VMEFCPGGDL HVARQRQPGR RFSISSARFY VAETVLALEY
201: LHMMGVVYRD LKPENVLVRG DGHIMLSDFD LSLKCDVVPR LLRHNSLPHN VSAAGGGRTD AGKPSCVPPI QPVLSCLFNG VHKCKAKEGA PKPGDNGGEA
301: DSAAGDRTSE PGDSNPELVV EPVSARSKSF VGTHEYLAPE VISGQGHGSA VDWWTLGVFM YEMMYGRTPF KGENNEKTLV NIIKQPLAFP RVAVASGREW
401: DEHLRAQDLM TQLLAKNPKK RLGSCTGSAE VKRHDFFKGV NWALVRSVRP PEVPKPPVVP APAPAQKKVL MMSRKERQEP YNYNPRSDER FEYF

Best Arabidopsis Sequence Match ( AT2G26700.1 )
(BLAST)

001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF

Arabidopsis Description

PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.