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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36350.1 CDX70218 AT5G04510.1 16973627
AT2G36350.1 CDY44862 AT5G04510.1 16973627
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039602.1-P Field mustard cytosol 9.23 94.67
CDX75049 Canola cytosol 82.57 87.83
Bra005275.1-P Field mustard cytosol 16.91 80.25
AT2G36350.1 Thale cress cytosol 85.18 69.02
CDY13336 Canola cytosol, plastid 59.82 66.09
CDX67542 Canola cytosol 65.02 62.27
Os12t0480200-01 Rice cytosol 33.16 59.3
CDX76251 Canola cytosol 61.64 57.59
CDX73596 Canola cytosol 69.83 53.43
CDX78131 Canola cytosol 69.44 52.87
KRH32674 Soybean cytosol 56.83 50.64
KRH30833 Soybean cytosol 56.7 50.35
CDY20744 Canola cytosol, plastid 31.47 50.21
CDY06552 Canola cytosol, plastid 31.6 50.21
KRH67882 Soybean cytosol 56.7 50.06
CDY36769 Canola cytosol, plastid 31.99 50.0
CDY11972 Canola cytosol, plastid 31.99 50.0
KRG96169 Soybean cytosol 56.31 49.88
CDY28629 Canola cytosol, plastid 31.99 49.2
CDY17366 Canola cytosol, plastid 31.99 49.2
VIT_08s0007g03600.t01 Wine grape cytosol 54.75 48.73
CDX74407 Canola cytosol, plastid 29.78 47.91
CDX94306 Canola cytosol 31.86 47.76
CDX89320 Canola cytosol 31.86 47.76
GSMUA_Achr10P... Banana cytosol 42.52 47.25
CDY17708 Canola cytosol 33.94 47.11
CDX77795 Canola cytosol 34.46 46.41
CDY30287 Canola cytosol, plastid 29.91 45.82
CDY33329 Canola cytosol 28.74 45.38
HORVU2Hr1G072580.1 Barley cytosol 46.16 45.34
CDX74691 Canola cytosol 32.64 45.06
GSMUA_Achr11P... Banana cytosol 42.0 45.05
TraesCS2D01G291200.1 Wheat cytosol 45.77 45.01
TraesCS2B01G309900.1 Wheat cytosol 45.77 45.01
TraesCS2A01G292800.1 Wheat cytosol 45.77 44.96
GSMUA_Achr8P16090_001 Banana nucleus 43.3 44.11
CDY56474 Canola cytosol 32.51 43.71
CDX70297 Canola cytosol 49.54 43.44
EES17014 Sorghum cytosol 44.21 43.04
CDX83710 Canola cytosol, plastid 30.69 42.99
Zm00001d003812_P002 Maize cytosol 44.6 42.93
CDY10368 Canola cytosol 50.33 42.81
Zm00001d041063_P001 Maize cytosol 43.95 42.78
CDY35093 Canola cytosol 28.35 42.75
OQU81510 Sorghum cytosol 44.86 42.65
Zm00001d025342_P003 Maize cytosol 44.47 42.59
GSMUA_Achr6P13320_001 Banana cytosol 39.79 42.15
CDY08710 Canola cytosol, plastid 23.93 41.72
TraesCS5B01G115200.1 Wheat cytosol 42.26 41.4
TraesCS5A01G107300.1 Wheat cytosol 42.26 41.4
TraesCS5D01G122400.1 Wheat cytosol 42.13 41.27
CDY43662 Canola cytosol 23.41 41.0
HORVU5Hr1G035610.2 Barley cytosol 41.87 40.97
CDX84294 Canola cytosol, plastid 23.28 40.77
CDY50542 Canola cytosol 30.3 40.73
CDY17273 Canola cytosol 23.15 40.55
CDY08414 Canola cytosol, plastid 29.78 40.11
CDY13725 Canola plastid 30.04 40.1
Solyc10g083500.1.1 Tomato nucleus 52.41 40.1
CDY42166 Canola cytosol, plastid 29.65 40.07
PGSC0003DMT400072395 Potato nucleus 52.28 40.0
CDY30488 Canola cytosol 31.99 39.81
PGSC0003DMT400006862 Potato cytosol 52.15 39.31
CDY48186 Canola cytosol 24.71 38.93
Solyc09g009380.2.1 Tomato cytosol 51.63 38.92
CDY23458 Canola cytosol 31.73 37.77
Os04t0410200-00 Rice cytosol 24.58 37.57
CDX97569 Canola nucleus 21.07 33.82
CDX98447 Canola nucleus 20.81 33.76
CDY67737 Canola nucleus 21.46 33.54
CDY30659 Canola nucleus 21.33 33.4
CDX77055 Canola cytosol 24.71 22.12
CDY33330 Canola cytosol, mitochondrion, nucleus 3.64 17.18
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078D9X0EnsemblPlants:CDX84133ProteinID:CDX84133
ProteinID:CDX84133.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00141142001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF92InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE04D6SEG:seg:
Description
BnaC04g08950D
Coordinates
chrLK031836:-:74099..77268
Molecular Weight (calculated)
84832.7 Da
IEP (calculated)
9.440
GRAVY (calculated)
-0.446
Length
769 amino acids
Sequence
(BLAST)
001: MGSFAGACEI VEEKDAVRLA KHSCKPALES SKDMERPPLN KGSMEYDIDQ LFQSISIKPS PGRVIGSSSF HHLETRTSAG TSRSTSPSKK SALKKPFPMG
101: GTPRSPRVGL SDSVSLKQAL RDLCISKASE MAAHKRLSKS AAASPRVSEA DRIKSLYRQV LNESAGRSGL PVDKGKRFVE VSLTPVDDIP SSSQSYASSP
201: PHKDGVVEID KHVTSLPSCS GSKADAEEEL DKSIVSSARV KSEPKALHSG LEGTLDNVPS AVRENIKLVN KVKRNIPRPK PRPKRKILVK KKLRVAVASS
301: ATKTSSNKET SKASSNSCEA IDSREADIVM QQDAIQNKQQ RENPTSSEKI IFSLSSKNSS IGNYSSSTSM SEESNLSRFS CGNKPHMSMD VRWEAIKHVK
401: LQCGGSLGLR HFNLLKKLGC GDIGTVYLAE LVGTSCLFAI KVMDNEFLAR RKKTPRAQAE RAILKMLDHP FLPTLYAQFI SDNLSCLVME YCPGGDLHVL
501: RQKQLSRCFS EPATRFYVAE VLLALEYLHM LGVIYRDLKP ENILVREDGH IMLTDFDLSL RCEVNPTLLK TTSLAGKDTA RMSGHYNTSN CIQPLCIEPS
601: CRVPCFSPRL SSKPRKQRRP DPLTQQFRSL PQLVAEPTEA RSNSFVGTHE YLAPEIIKGE GHGAAVDWWT FGNLKFPDSP LVSFQAKDLI RRLVMKNPES
701: RLGWEKGAAE IKRHPFFEGL NWALIRCAIP PELPDVYENG ATEATSPKGN SNGYLECKAM GDHLDFELF
Best Arabidopsis Sequence Match ( AT2G36350.1 )
(BLAST)
001: MESFAGSCEI VEEKDAVRLA KHSSRYCMSP LGSSKDMEQR PALKSGYQGS MEYDIDQLFQ SITIKPSPRR VMGSSFHHLE TSASAGTSRS TSPSNKGAMK
101: KPFPMGTPRS PRVGPSDSIS LKQALRDLCI SKASEMASQK RLSKSAAASP RVSEADRIKT LYRQVLNESA GKPGLPVDKG KSLVEISLTP VVDIPSSSQS
201: VPQRYDVLET EPSNFISEPS QAEILLHVLG NGSGIKTVGY GMLETVSLCK SNKSGSCLSS GSGDYEIEID ENHTSPPHMV IEDQLVEIDK HVTSLPSCSG
301: SKVDTEELDK SIVSSARVKS EPTALSSGLK GKLDNFPGSG TEKSKLVSKV TRNIPRPKPR PKKKILLKKK LKIVVNSATK MVEEVDTSLE PSASQLLCQK
401: CHCAVKSTST ENHPPSNTSH TTDKNVSIEA DQESLASPRL IRIVKCNKEA SKGSSDSCEV SDSGEAVIVM KQEVSPSNYS GKGDADEQIR ANPTSSEKFD
501: FSLSSKNSLG DYSSSTSMSE ESNLSRFSCG NKPHMSMDVR WEAVKHVKLQ YGSLGLRHFN LLKKLGCGDI GTVYLAELVG TNCLFAIKVM DNEFLARRKK
601: TPRAQAERAI LKMLDHPFLP TLYAQFTSDN LSCLVMEYCP GGDLHVLRQK QLSRCFSEPA TRFYVAEILL ALEYLHMLGV IYRDLKPENI LVREDGHIML
701: TDFDLSLRCA VNPTLLRSTS PPEKDPARMS GPYSTSNCIQ PLCIEPSCRV PCFSPRLLST QARNQKPRKP KRPDLLTQQF RSLPQLVAEP TEARSNSFVG
801: THEYLAPEII KGEGHGAAVD WWTFGVLLYE LLYGKTPFKG YDNEETLSNV VYQNLKFPDS PLVSFQAKEL IRRLLVKDPE SRLGSEKGAA EIKRHPFFEG
901: LNWALIRCAI PPELPDIYDN GATEATSPEG NNRYLECKAI GDHLEFELF
Arabidopsis Description
KIPK2Serine/threonine-protein kinase KIPK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.