Factsheet for Bra011545.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003500.1-P
Bra003755.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018280.1-P
Bra019715.1-P
Bra020471.1-P
Bra024478.1-P
Bra026895.1-P
Bra026896.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34590.1	Bra019715.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026895.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026896.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra003755.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra008192.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra015847.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra024478.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra037235.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra039631.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra018280.1-P	AT2G31070.1	21245844
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra011545.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra017664.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra034639.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra009793.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra020471.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75445	Canola	nucleus	86.03	100.0
CDX69072	Canola	nucleus	82.68	96.1
Bra017664.1-P	Field mustard	nucleus	77.09	90.2
Bra034639.1-P	Field mustard	nucleus	69.83	88.03
AT4G34590.1	Thale cress	nucleus	73.18	82.39
Solyc04g080740.1.1	Tomato	nucleus	43.58	53.06
PGSC0003DMT400009493	Potato	nucleus	43.58	52.0
KRH15149	Soybean	nucleus	46.93	50.6
KRH51803	Soybean	nucleus, plastid	43.02	50.33
KRH61129	Soybean	nucleus, plastid	41.9	49.02
Bra024478.1-P	Field mustard	nucleus	40.22	46.45
Bra008192.1-P	Field mustard	nucleus	41.34	44.85
KRH05862	Soybean	nucleus	48.04	44.79
Bra039631.1-P	Field mustard	nucleus	41.9	44.64
Bra037235.1-P	Field mustard	nucleus, plastid	41.34	44.05
Bra003755.1-P	Field mustard	nucleus	41.9	41.9
Os09t0306400-01	Rice	nucleus	35.75	41.83
EER96530	Sorghum	nucleus	36.87	41.51
Bra007679.1-P	Field mustard	nucleus	32.4	41.13
Bra003500.1-P	Field mustard	nucleus	29.61	39.55
TraesCS5B01G176700.1	Wheat	nucleus	31.28	36.6
TraesCS5A01G179000.1	Wheat	nucleus	31.28	36.36
TraesCS5D01G183500.1	Wheat	nucleus	31.28	36.36
HORVU5Hr1G054510.1	Barley	nucleus	31.28	36.36
Zm00001d005578_P001	Maize	nucleus	33.52	35.29
EES14897	Sorghum	nucleus, plastid	32.96	33.52
Zm00001d030577_P001	Maize	nucleus	28.49	32.28
Os08t0357300-01	Rice	cytosol	18.99	30.09
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	16.76	24.79
Bra015847.1-P	Field mustard	nucleus	37.43	18.72

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra011545	EnsemblPlants:Bra011545.1	EnsemblPlants:Bra011545.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4D4Y8	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF229	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00025456FA
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT4G34590 (E=5e-048) ATB2, GBF6, AtbZIP11, BZIP11 | GBF6 (G-BOX BINDING FACTOR 6); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA01:-:1740077..1744516

Molecular Weight (calculated)

20122.0 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.485

Length

179 amino acids

Sequence
(BLAST)

001: MNAATICLLQ RPNNASTKAC LFVYCMESSS SGTTSSTIQT SSGSEENLME QRKRKRMLSN RESARRSRMK KQKLLDDLTA QVNQLKKENS EIVTSVSITT
101: QHYLAVEAEN SVLRAQLDEL SHRLESLNDI IGLLENTNGV WPNPLTGPES DDFLVNQMNM NMFHMMNQPL MASSDALLY

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.