Factsheet for Bra034639.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003500.1-P
Bra003755.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018280.1-P
Bra019715.1-P
Bra020471.1-P
Bra024478.1-P
Bra026895.1-P
Bra026896.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34590.1	Bra019715.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026895.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026896.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra003755.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra008192.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra015847.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra024478.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra037235.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra039631.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra018280.1-P	AT2G31070.1	21245844
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra011545.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra017664.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra034639.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra009793.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra020471.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76292	Canola	nucleus	100.0	100.0
CDY31528	Canola	nucleus	98.59	98.59
CDY17470	Canola	nucleus	98.59	98.59
Bra017664.1-P	Field mustard	nucleus	84.51	78.43
AT4G34590.1	Thale cress	nucleus	82.39	73.58
Bra011545.1-P	Field mustard	nucleus	88.03	69.83
Solyc04g080740.1.1	Tomato	nucleus	51.41	49.66
PGSC0003DMT400009493	Potato	nucleus	50.7	48.0
KRH15149	Soybean	nucleus	52.82	45.18
Bra024478.1-P	Field mustard	nucleus	47.18	43.23
KRH51803	Soybean	nucleus, plastid	46.48	43.14
KRH61129	Soybean	nucleus, plastid	45.77	42.48
Bra039631.1-P	Field mustard	nucleus	49.3	41.67
Bra037235.1-P	Field mustard	nucleus, plastid	48.59	41.07
Bra008192.1-P	Field mustard	nucleus	47.18	40.61
Bra007679.1-P	Field mustard	nucleus	40.14	40.43
Bra003500.1-P	Field mustard	nucleus	37.32	39.55
KRH05862	Soybean	nucleus	52.82	39.06
Bra003755.1-P	Field mustard	nucleus	48.59	38.55
Os09t0306400-01	Rice	nucleus	40.85	37.91
EER96530	Sorghum	nucleus	40.85	36.48
Zm00001d005578_P001	Maize	nucleus	41.55	34.71
TraesCS5D01G183500.1	Wheat	nucleus	36.62	33.77
TraesCS5A01G179000.1	Wheat	nucleus	36.62	33.77
TraesCS5B01G176700.1	Wheat	nucleus	35.92	33.33
HORVU5Hr1G054510.1	Barley	nucleus	35.92	33.12
EES14897	Sorghum	nucleus, plastid	36.62	29.55
Zm00001d030577_P001	Maize	nucleus	32.39	29.11
Os08t0357300-01	Rice	cytosol	21.83	27.43
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	20.42	23.97
Bra015847.1-P	Field mustard	nucleus	44.37	17.6

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra034639	EnsemblPlants:Bra034639.1	EnsemblPlants:Bra034639.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4F0P4	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF229	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002546398
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT4G34590 (E=5e-051) ATB2, GBF6, AtbZIP11, BZIP11 | GBF6 (G-BOX BINDING FACTOR 6); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA08:-:12338075..12338503

Molecular Weight (calculated)

16139.2 Da

IEP (calculated)

4.794

GRAVY (calculated)

-0.654

Length

142 amino acids

Sequence
(BLAST)

001: MDPSSSGSEE SLMEQRKRKR MLSNRESARR SRMKKQKLLD DLTAQVNQLK EQNNEILTSV SITTQHYLTV EAENSVLKAQ LDELSHRLES LNGIIEFLES
101: TNGTCPNPLT GPEPDDFLVN QMNMNMFCMN QPLMASSDAL LY

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.