Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49605 | Canola | nucleus | 79.31 | 82.73 |
| CDX85411 | Canola | nucleus | 77.93 | 79.58 |
| Bra010035.1-P | Field mustard | nucleus | 77.24 | 78.87 |
| CDX86233 | Canola | nucleus | 77.24 | 78.87 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:835005 | UniProt:A0A178UPE4 | ProteinID:AED95813.1 | EMBL:AF400618 |
| ArrayExpress:AT5G49450 | EnsemblPlantsGene:AT5G49450 | RefSeq:AT5G49450 | TAIR:AT5G49450 | RefSeq:AT5G49450-TAIR-G | EnsemblPlants:AT5G49450.1 |
| TAIR:AT5G49450.1 | EMBL:AY088207 | EMBL:AY136307 | Symbol:AtbZIP1 | ProteinID:BAB09915.1 | EMBL:BT000400 |
| ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006521 | GO:GO:0006950 | GO:GO:0006970 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009267 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009791 | GO:GO:0009901 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010182 |
| GO:GO:0019725 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:0046982 | GO:GO:0071333 |
| InterPro:IPR004827 | RefSeq:NP_199756.1 | ProteinID:OAO95380.1 | PFAM:PF07716 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0009066 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF351 | UniProt:Q9FGX2 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00000AC17E |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BZIP1Basic leucine zipper 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGX2]
Coordinates
chr5:+:20051829..20052735
Molecular Weight (calculated)
16225.2 Da
IEP (calculated)
9.715
GRAVY (calculated)
-0.875
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIHEISSLE RRIKENSERC RAVKQRLDSV ETENAGLRSE KIWLSSYVSD LENMIATTSL
101: TLTQSGGGDC VDDQNANAGI AVGDCRRTPW KLSCGSLQPM ASFKT
101: TLTQSGGGDC VDDQNANAGI AVGDCRRTPW KLSCGSLQPM ASFKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.