Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 18.58 | 59.57 |
| VIT_14s0030g02200.t01 | Wine grape | nucleus | 38.72 | 41.37 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 19.69 | 25.5 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 4.2 | 13.19 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100261345 | wikigene:100261345 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C |
| ProteinID:CCB44698 | ProteinID:CCB44698.1 | ncoils:Coil | UniProt:F6GXL2 | EMBL:FN594965 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | EntrezGene:LOC100261345 | wikigene:LOC100261345 | PFAM:PF00170 | PFAM:PF12498 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF90 | SMART:SM00338 | SUPFAM:SSF57959 |
| TIGR:TC63606 | UniParc:UPI000198379E | ArrayExpress:VIT_07s0141g00170 | EnsemblPlantsGene:VIT_07s0141g00170 | EnsemblPlants:VIT_07s0141g00170.t01 | unigene:Vvi.1375 |
| RefSeq:XP_002281328 | RefSeq:XP_002281328.1 | InterPro:bZIP | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:116657..126811
Molecular Weight (calculated)
48232.3 Da
IEP (calculated)
5.334
GRAVY (calculated)
-0.548
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVFSSDDL EAMWTAVTAG TSAGMSRISS EWMLEKFLLE ASSSSPASST SCPVSAVSQC PAPYADVTAP YAAAAAAAQS SSSKSRPRGE DDEVVEIKVR
101: SPPSDQPPEN PVDHQAFLRK RLDLACAAVA LSRESGVKPQ ESAVKPQESA VKPQESALSM QTQSKPSQLG SQAVATVDPG HVFPITQDKV EGGSLGIPAS
201: ATSQNKSGAQ VITTTSGSSR ELSDDDELEG ETDTTGNMDP ADEKRARRML SNRESARRSR RRKQEHLSEL ETQVSQLGVE NSSLLKRLTD INQKYNEAAV
301: DNRVLKADVE TLRTKVRMAE DAVKRVTGLT SLLPAIPDIP SMGMPFVNNT SSNTSADAAV PVQRDSNHFI HPPVPNNLIA PPHDQRLNNG FPTNCPPLPT
401: ESLLNGAGPK NMPQTSPMQN VSRVCVGANP CGVMPGWDSV PSHVTTNIKN QN
101: SPPSDQPPEN PVDHQAFLRK RLDLACAAVA LSRESGVKPQ ESAVKPQESA VKPQESALSM QTQSKPSQLG SQAVATVDPG HVFPITQDKV EGGSLGIPAS
201: ATSQNKSGAQ VITTTSGSSR ELSDDDELEG ETDTTGNMDP ADEKRARRML SNRESARRSR RRKQEHLSEL ETQVSQLGVE NSSLLKRLTD INQKYNEAAV
301: DNRVLKADVE TLRTKVRMAE DAVKRVTGLT SLLPAIPDIP SMGMPFVNNT SSNTSADAAV PVQRDSNHFI HPPVPNNLIA PPHDQRLNNG FPTNCPPLPT
401: ESLLNGAGPK NMPQTSPMQN VSRVCVGANP CGVMPGWDSV PSHVTTNIKN QN
001: MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
Arabidopsis Description
BZIP25Basic leucine zipper 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1G6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.