Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g059780.1.1 | Tomato | nucleus | 85.71 | 43.33 |
| Solyc06g054680.1.1 | Tomato | nucleus | 83.52 | 42.22 |
| PGSC0003DMT400094886 | Potato | nucleus | 74.73 | 37.78 |
| Solyc03g033930.1.1 | Tomato | cytosol | 32.97 | 30.0 |
| Solyc04g056740.1.1 | Tomato | nucleus | 56.04 | 28.33 |
| Solyc10g050900.1.1 | Tomato | nucleus | 50.55 | 27.22 |
| Solyc10g050940.1.1 | Tomato | nucleus | 48.35 | 26.04 |
| Solyc04g056550.1.1 | Tomato | nucleus | 50.55 | 25.27 |
| Solyc10g050950.1.1 | Tomato | nucleus | 38.46 | 21.74 |
| Solyc01g097850.1.1 | Tomato | nucleus | 36.26 | 19.19 |
| Solyc10g018110.1.1 | Tomato | nucleus | 37.36 | 18.48 |
| Solyc03g034260.1.1 | Tomato | nucleus | 36.26 | 17.93 |
| Solyc10g018080.1.1 | Tomato | cytosol | 27.47 | 16.56 |
| Solyc03g033900.1.1 | Tomato | nucleus | 32.97 | 16.39 |
| Solyc03g033940.1.1 | Tomato | nucleus | 32.97 | 15.96 |
| Solyc03g033880.1.1 | Tomato | cytosol | 31.87 | 15.76 |
| Solyc03g033570.1.1 | Tomato | nucleus | 30.77 | 15.38 |
| Solyc03g007020.1.1 | Tomato | mitochondrion, nucleus, plastid | 35.16 | 14.88 |
| Solyc03g033890.1.1 | Tomato | nucleus | 17.58 | 11.43 |
| Solyc01g106710.1.1 | Tomato | nucleus | 19.78 | 8.14 |
| AT1G54760.1 | Thale cress | nucleus | 13.19 | 7.45 |
| Solyc04g025030.1.1 | Tomato | mitochondrion | 10.99 | 7.41 |
| Solyc01g106720.1.1 | Tomato | nucleus | 16.48 | 7.11 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 8.79 | 6.84 |
| Solyc11g069770.1.1 | Tomato | nucleus | 13.19 | 6.63 |
| AT1G29962.1 | Thale cress | nucleus | 13.19 | 6.49 |
| Solyc04g064860.1.1 | Tomato | plastid | 16.48 | 6.44 |
| AT1G28460.1 | Thale cress | nucleus | 12.09 | 6.04 |
| AT1G28450.1 | Thale cress | nucleus | 12.09 | 5.95 |
| Solyc01g106730.1.1 | Tomato | mitochondrion | 14.29 | 5.88 |
| Solyc10g018070.1.1 | Tomato | nucleus | 7.69 | 5.88 |
| Solyc04g025110.1.1 | Tomato | mitochondrion, nucleus, plastid | 7.69 | 5.38 |
| Solyc04g047870.1.1 | Tomato | mitochondrion, nucleus | 10.99 | 5.26 |
| Solyc01g106700.2.1 | Tomato | nucleus | 12.09 | 5.16 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 13.19 | 4.88 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 12.09 | 4.51 |
| CDX99867 | Canola | nucleus | 8.79 | 4.12 |
| CDY26304 | Canola | nucleus | 7.69 | 3.78 |
| Bra032347.1-P | Field mustard | nucleus | 6.59 | 3.23 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 10.99 | 2.88 |
| Solyc01g060300.1.1 | Tomato | nucleus | 4.4 | 1.9 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 1.1 | 0.72 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc06g065960.1.1 | EnsemblPlantsGene:Solyc06g065960.1 | ncoils:Coil | UniParc:UPI0002765B92 | UniProt:K4C7M4 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6:-:41342481..41342756
Molecular Weight (calculated)
10965.8 Da
IEP (calculated)
4.476
GRAVY (calculated)
-0.882
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MNAARNEVNQ LKTKLEELDV IEDIAIAKRN SYEQMKETRQ KDWWELTGQL NRDEVFIFET WLNETDSYLH HRLNQLEIEP SSTMRYESFG V
001: MPRSMSSDRL VQWDDDSNRP HKKLKHSTTI SETSVIEDDA DSSTQMGHSI KTIPKSDRWV VTRYLGNSSR SSVYLAESTI EGEEDYLPDE MTIKSIEISQ
101: ASRLMNEEKF LSRLQNPFVV SFYGHEVTIE KDGKDPLLEK MYYNTLQEYS SGRNLATHIE KNRGKLPEDD VRSLANEILL GLKYIHEEKI IHCDIKPKNI
201: ILPFENNLFA QIAGFGKAIK KWSVEYGEGL GHRIGTSRLL PPEVMMDMVL DYGADVWAFG CTVLEMLTGE RVWSEFGKLD WEGWKTLIGE SGSVPYIPNY
301: LSDKAKDFLA KCLERDPSKR WSVDSLLEHE FLKWIDEDEE EEIYEEEEDD FYDGIEDVDE EYEANLEAEA AVEEEEAIEI DEEYPKEESE DDL
101: ASRLMNEEKF LSRLQNPFVV SFYGHEVTIE KDGKDPLLEK MYYNTLQEYS SGRNLATHIE KNRGKLPEDD VRSLANEILL GLKYIHEEKI IHCDIKPKNI
201: ILPFENNLFA QIAGFGKAIK KWSVEYGEGL GHRIGTSRLL PPEVMMDMVL DYGADVWAFG CTVLEMLTGE RVWSEFGKLD WEGWKTLIGE SGSVPYIPNY
301: LSDKAKDFLA KCLERDPSKR WSVDSLLEHE FLKWIDEDEE EEIYEEEEDD FYDGIEDVDE EYEANLEAEA AVEEEEAIEI DEEYPKEESE DDL
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LX79]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.