Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G176700.1 | Wheat | nucleus | 65.0 | 69.03 |
| TraesCS7B01G080300.2 | Wheat | cytosol | 64.58 | 64.32 |
| TraesCS7A01G175200.2 | Wheat | nucleus | 63.33 | 63.33 |
| Os06t0217300-01 | Rice | nucleus | 52.08 | 56.05 |
| HORVU6Hr1G077300.8 | Barley | nucleus | 48.75 | 50.87 |
| EER88077 | Sorghum | nucleus | 46.67 | 49.78 |
| GSMUA_Achr3P06800_001 | Banana | nucleus | 37.08 | 38.86 |
| GSMUA_Achr10P... | Banana | nucleus | 34.58 | 36.4 |
| CDY25607 | Canola | nucleus | 25.83 | 35.43 |
| Solyc04g076280.2.1 | Tomato | vacuole | 27.92 | 34.36 |
| VIT_03s0167g00070.t01 | Wine grape | nucleus | 25.42 | 33.33 |
| HORVU4Hr1G077850.13 | Barley | nucleus | 32.08 | 32.91 |
| VIT_00s0313g00070.t01 | Wine grape | nucleus | 30.42 | 32.16 |
| PGSC0003DMT400041773 | Potato | nucleus | 31.25 | 31.51 |
| PGSC0003DMT400024247 | Potato | nucleus | 30.83 | 31.49 |
| CDY13746 | Canola | nucleus | 30.83 | 31.36 |
| CDX76906 | Canola | nucleus | 30.42 | 30.93 |
| KRH69674 | Soybean | nucleus | 29.17 | 30.84 |
| Bra038511.1-P | Field mustard | nucleus | 30.83 | 30.71 |
| KRH74496 | Soybean | nucleus | 28.75 | 30.4 |
| GSMUA_Achr9P15180_001 | Banana | nucleus | 36.67 | 29.93 |
| CDX89487 | Canola | nucleus | 29.17 | 29.66 |
| AT2G22540.1 | Thale cress | nucleus | 29.58 | 29.58 |
| AT4G24540.1 | Thale cress | nucleus | 27.08 | 29.55 |
| CDY03445 | Canola | nucleus | 27.08 | 29.41 |
| Bra030228.1-P | Field mustard | nucleus | 28.75 | 29.24 |
| Bra019221.1-P | Field mustard | nucleus | 26.25 | 29.17 |
| CDY11019 | Canola | nucleus | 26.25 | 29.17 |
| KRH52935 | Soybean | nucleus | 28.33 | 29.06 |
| CDX92641 | Canola | nucleus | 27.08 | 28.38 |
| Solyc11g010570.1.1 | Tomato | nucleus | 31.25 | 28.3 |
| KRH42097 | Soybean | nucleus | 24.17 | 28.29 |
| KRH49819 | Soybean | nucleus | 24.17 | 28.16 |
| PGSC0003DMT400083739 | Potato | nucleus | 24.58 | 26.7 |
| VIT_15s0107g00120.t01 | Wine grape | nucleus | 19.58 | 26.11 |
| VIT_03s0017g00440.t01 | Wine grape | nucleus | 10.0 | 25.53 |
| KRH10603 | Soybean | nucleus | 20.0 | 23.08 |
| KRH10606 | Soybean | nucleus | 20.0 | 22.75 |
| KRH21764 | Soybean | nucleus | 19.17 | 22.33 |
| VIT_18s0001g07460.t01 | Wine grape | nucleus | 28.33 | 21.25 |
| Solyc01g105800.2.1 | Tomato | nucleus | 23.75 | 20.43 |
| KRH21757 | Soybean | nucleus | 20.42 | 19.76 |
| VIT_03s0167g00100.t01 | Wine grape | nucleus | 3.75 | 14.75 |
| VIT_15s0024g01860.t01 | Wine grape | nucleus | 3.75 | 13.85 |
| VIT_03s0017g00450.t01 | Wine grape | nucleus | 4.17 | 13.33 |
| VIT_00s0729g00010.t01 | Wine grape | nucleus | 3.33 | 12.9 |
| VIT_15s0024g02000.t01 | Wine grape | nucleus | 4.58 | 12.79 |
| VIT_03s0017g00360.t01 | Wine grape | nucleus | 3.33 | 12.7 |
| KRH62216 | Soybean | nucleus | 3.33 | 12.12 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A287W1H0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G036130 | EnsemblPlants:HORVU7Hr1G036130.10 | InterPro:IPR002487 |
| PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF342 | InterPro:TF_Kbox | UniParc:UPI000B47CAE2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:82946291..82953109
Molecular Weight (calculated)
26646.8 Da
IEP (calculated)
7.699
GRAVY (calculated)
-0.673
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: RSPAPICLTP SLLFGLARPP MGAHRTPRPR GGERDLSLPL PSPFPSLPLP LAGRRLYTRR THTGAHTTAQ QRGQKSGRMN EIIDKYSTHS KNLGKSDQQP
101: AIDLNLEHCK YDSLNEQLAE ASLRLRHMRG EELDGLSVGE LQQMEKNLET GLQRVLCTKD RQFMQQISDL QQKGTQLAEE NMRLKNQMHE VPTASMVAVA
201: DVVPEDVHSS DSVMTAVHSA SSQDNDDGSD ISLKLALPWK
101: AIDLNLEHCK YDSLNEQLAE ASLRLRHMRG EELDGLSVGE LQQMEKNLET GLQRVLCTKD RQFMQQISDL QQKGTQLAEE NMRLKNQMHE VPTASMVAVA
201: DVVPEDVHSS DSVMTAVHSA SSQDNDDGSD ISLKLALPWK
001: MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE
101: IADKSHRLRQ MRGEELQGLD IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER LGMQICNNVH AHGGAESENA
201: AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG
101: IADKSHRLRQ MRGEELQGLD IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER LGMQICNNVH AHGGAESENA
201: AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG
Arabidopsis Description
SVPAt2g22540 [Source:UniProtKB/TrEMBL;Acc:A7XFU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.