Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10606 | Soybean | nucleus | 73.79 | 86.73 |
| VIT_03s0167g00100.t01 | Wine grape | nucleus | 17.74 | 72.13 |
| VIT_03s0017g00360.t01 | Wine grape | nucleus | 18.15 | 71.43 |
| VIT_00s0729g00010.t01 | Wine grape | nucleus | 17.74 | 70.97 |
| KRH62216 | Soybean | nucleus | 18.15 | 68.18 |
| VIT_15s0024g01860.t01 | Wine grape | nucleus | 17.74 | 67.69 |
| VIT_03s0017g00440.t01 | Wine grape | nucleus | 22.58 | 59.57 |
| VIT_03s0017g00450.t01 | Wine grape | nucleus | 17.74 | 58.67 |
| VIT_15s0024g02000.t01 | Wine grape | nucleus | 18.15 | 52.33 |
| KRH49819 | Soybean | nucleus | 42.34 | 50.97 |
| Zm00001d044899_P001 | Maize | nucleus | 14.52 | 50.7 |
| KRH42097 | Soybean | nucleus | 41.13 | 49.76 |
| KRH21764 | Soybean | nucleus | 40.73 | 49.03 |
| KRH10603 | Soybean | nucleus | 39.92 | 47.6 |
| VIT_15s0107g00120.t01 | Wine grape | nucleus | 34.27 | 47.22 |
| PGSC0003DMT400083739 | Potato | nucleus | 38.31 | 42.99 |
| KRH69674 | Soybean | nucleus | 38.31 | 41.85 |
| KRH74496 | Soybean | nucleus | 37.9 | 41.41 |
| KRH52935 | Soybean | nucleus | 37.1 | 39.32 |
| GSMUA_Achr10P... | Banana | nucleus | 35.89 | 39.04 |
| GSMUA_Achr3P06800_001 | Banana | nucleus | 34.68 | 37.55 |
| Solyc01g105800.2.1 | Tomato | nucleus | 41.13 | 36.56 |
| Zm00001d018142_P001 | Maize | nucleus | 31.85 | 35.75 |
| Os02t0761000-01 | Rice | nucleus | 32.26 | 35.09 |
| TraesCS6A01G313800.1 | Wheat | nucleus | 32.26 | 35.09 |
| TraesCS6B01G343900.1 | Wheat | cytosol | 32.26 | 35.09 |
| TraesCS6D01G293200.1 | Wheat | nucleus | 32.26 | 35.09 |
| Os06t0217300-01 | Rice | nucleus | 31.45 | 34.98 |
| Zm00001d052180_P001 | Maize | nucleus | 31.05 | 34.84 |
| KXG31156 | Sorghum | nucleus | 31.45 | 34.21 |
| TraesCS7D01G176700.1 | Wheat | nucleus | 31.05 | 34.07 |
| KXG40019 | Sorghum | nucleus | 31.05 | 33.19 |
| HORVU6Hr1G077300.8 | Barley | nucleus | 30.65 | 33.04 |
| TraesCS4D01G301100.1 | Wheat | nucleus | 29.84 | 32.74 |
| TraesCS4B01G302600.2 | Wheat | nucleus | 29.84 | 32.46 |
| EER88077 | Sorghum | nucleus | 29.44 | 32.44 |
| VIT_03s0167g00070.t01 | Wine grape | nucleus | 23.79 | 32.24 |
| TraesCS7A01G175200.2 | Wheat | nucleus | 30.24 | 31.25 |
| HORVU4Hr1G077850.13 | Barley | nucleus | 29.44 | 31.2 |
| TraesCS7B01G080300.2 | Wheat | cytosol | 30.24 | 31.12 |
| GSMUA_Achr9P15180_001 | Banana | nucleus | 36.29 | 30.61 |
| Os03t0186600-01 | Rice | nucleus | 30.24 | 30.24 |
| Zm00001d027957_P001 | Maize | nucleus | 30.24 | 29.64 |
| TraesCS4A01G002600.1 | Wheat | nucleus | 17.34 | 26.38 |
| Zm00001d027955_P001 | Maize | extracellular, golgi | 15.32 | 21.11 |
| HORVU7Hr1G036130.10 | Barley | nucleus, plastid | 19.76 | 20.42 |
Protein Annotations
| EntrezGene:100818433 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0GU09 | EMBL:ACUP02008363 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_13G256900 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRH21757 | ProteinID:KRH21757 | ProteinID:KRH21757.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF179 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0003DE8CE7 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:36205253..36216110
Molecular Weight (calculated)
28680.9 Da
IEP (calculated)
10.122
GRAVY (calculated)
-0.500
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHIHVFPHT VFSLESKDWA RVAFASAFSI AKESSAFHRN KKMVRRKIPI KKIDDVTARQ VTFSKRKSGL FKKARELSLL CDAEIALIVF SPGGKLFDYG
101: SSSMQKVIER HILRSELNLE KLDQSCPTEQ VRCNYADLNK EFADRTREMR QLNGEELQGL TLRELQKLEE RLDSSLNRVY KAKVENFIKE IGILKEKGKK
201: LMEDNMLIKQ MIKLPRNEIC SVQRHEHEQG QLFDTSLTLG LPFPAGSK
101: SSSMQKVIER HILRSELNLE KLDQSCPTEQ VRCNYADLNK EFADRTREMR QLNGEELQGL TLRELQKLEE RLDSSLNRVY KAKVENFIKE IGILKEKGKK
201: LMEDNMLIKQ MIKLPRNEIC SVQRHEHEQG QLFDTSLTLG LPFPAGSK
001: MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE
101: IADKSHRLRQ MRGEELQGLD IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER LGMQICNNVH AHGGAESENA
201: AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG
101: IADKSHRLRQ MRGEELQGLD IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER LGMQICNNVH AHGGAESENA
201: AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG
Arabidopsis Description
SVPAt2g22540 [Source:UniProtKB/TrEMBL;Acc:A7XFU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.