Factsheet for HORVU5Hr1G000480.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G002500.1	Wheat	mitochondrion, nucleus	44.74	91.4
TraesCS7B01G009900.1	Wheat	mitochondrion, nucleus	76.84	78.07
TraesCS5D01G002100.1	Wheat	nucleus	80.0	67.56
HORVU5Hr1G000370.3	Barley	nucleus	48.95	44.93
HORVU7Hr1G023940.2	Barley	nucleus	50.0	41.3
HORVU6Hr1G073040.2	Barley	nucleus	48.95	38.59
HORVU1Hr1G008290.4	Barley	nucleus	43.68	34.58
HORVU7Hr1G024000.2	Barley	nucleus	48.42	34.46
HORVU2Hr1G080490.1	Barley	nucleus, plastid	53.68	33.33
HORVU1Hr1G008300.3	Barley	nucleus	43.16	28.87
HORVU5Hr1G095710.1	Barley	nucleus	35.79	28.69
HORVU5Hr1G076400.1	Barley	nucleus	35.26	26.59
HORVU0Hr1G032300.1	Barley	nucleus	36.32	25.84
HORVU1Hr1G023620.1	Barley	nucleus	34.21	25.79
HORVU7Hr1G054220.3	Barley	nucleus	34.74	25.78
HORVU6Hr1G066140.9	Barley	nucleus	36.32	25.75
HORVU7Hr1G025700.6	Barley	nucleus	35.26	24.28
HORVU3Hr1G026650.1	Barley	nucleus	33.68	23.62
HORVU2Hr1G063800.7	Barley	nucleus, plastid	37.37	23.2
HORVU5Hr1G095630.3	Barley	nucleus, plastid	37.37	23.13
HORVU4Hr1G067680.14	Barley	nucleus	32.11	21.48
HORVU1Hr1G029220.1	Barley	nucleus	35.26	20.55

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A287Q5J9	ncoils:Coil	GO:GO:0000977	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983
EnsemblPlantsGene:HORVU5Hr1G000480	EnsemblPlants:HORVU5Hr1G000480.1	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	InterPro:MADS_MEF2-like
PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297
PANTHER:PTHR11945	PANTHER:PTHR11945:SF263	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI000B480DA6	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:1866137..1867914

Molecular Weight (calculated)

22173.1 Da

IEP (calculated)

10.060

GRAVY (calculated)

-0.524

Length

190 amino acids

Sequence
(BLAST)

001: MARGKIVIRR IEKMSSRQVT FSKRRRGLLK KAHELAILCD VQVGVIVFSS TGRLYEYASS TTTTTMGMPS IIHKYQSARE HQQLLNPVSQ IMFWEGEVRK
101: LQQEMQILQD HQRKLMGERL SNLGVNDLCL LENQLENSLR CIREKKEQSF ANHTVQLNEK GYIFHQENFQ LSEEIKLMHA QNLELKNKLS

Best Arabidopsis Sequence Match ( AT2G14210.1 )
(BLAST)

001: MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELSILCD AEVGVIIFSS TGKLYDYASN SSMKTIIERY NRVKEEQHQL LNHASEIKFW QREVASLQQQ
101: LQYLQECHRK LVGEELSGMN ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK LQKKVHGRTN AIEGNSSVDP
201: ISNGTTTYAP PQLQLIQLQP APREKSIRLG LQLS

Arabidopsis Description

ANR1AGAMOUS-like 44 [Source:TAIR;Acc:AT2G14210]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.