Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G021100.1 | Wheat | nucleus | 37.63 | 53.03 |
| TraesCS7B01G020900.1 | Wheat | nucleus | 37.63 | 50.72 |
| HORVU5Hr1G000480.1 | Barley | nucleus | 91.4 | 44.74 |
| TraesCS5D01G002100.1 | Wheat | nucleus | 97.85 | 40.44 |
| TraesCS7B01G009900.1 | Wheat | mitochondrion, nucleus | 79.57 | 39.57 |
| TraesCS7B01G009800.1 | Wheat | nucleus | 56.99 | 23.04 |
| TraesCS7B01G009500.1 | Wheat | nucleus | 56.99 | 23.04 |
| TraesCS2B01G344000.1 | Wheat | nucleus | 58.06 | 22.5 |
| TraesCS6B01G322700.2 | Wheat | nucleus | 58.06 | 22.41 |
| TraesCS5B01G002400.1 | Wheat | nucleus | 54.84 | 21.98 |
| TraesCS1B01G058200.1 | Wheat | nucleus | 51.61 | 21.52 |
| TraesCS1B01G058100.1 | Wheat | nucleus | 53.76 | 20.58 |
| TraesCS1B01G058300.1 | Wheat | nucleus | 50.54 | 19.92 |
| TraesCS4B01G245700.1 | Wheat | nucleus | 43.01 | 18.52 |
| TraesCS5B01G396700.1 | Wheat | nucleus | 43.01 | 16.95 |
| TraesCS7B01G020800.1 | Wheat | nucleus | 40.86 | 16.74 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 45.16 | 16.67 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 45.16 | 16.47 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 47.31 | 16.36 |
| TraesCS7B01G158600.1 | Wheat | nucleus | 43.01 | 16.26 |
| TraesCS4B01G245800.1 | Wheat | nucleus | 43.01 | 16.19 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 43.01 | 15.94 |
| TraesCS4B01G277800.1 | Wheat | nucleus | 41.94 | 15.79 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 45.16 | 15.73 |
| TraesCS5B01G286100.2 | Wheat | nucleus | 41.94 | 15.48 |
| TraesCS6B01G286400.1 | Wheat | nucleus | 43.01 | 15.44 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 45.16 | 15.33 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 47.31 | 14.19 |
| TraesCS7B01G021000.1 | Wheat | nucleus | 9.68 | 4.81 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF172 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS5B01G002500 | EnsemblPlants:TraesCS5B01G002500.1 |
| TIGR:cd00265 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:3867064..3867802
Molecular Weight (calculated)
10525.0 Da
IEP (calculated)
11.094
GRAVY (calculated)
-0.195
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MARGKIVIRR IEKMSNRQVT FSKRRHGLLK KARELAILCD VQVGVIVFSS TGRLYEYASS TTSASTGMPS IIHKYQSAQE HQQLLNPVSQ IMF
001: MGRGKIVIQR IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLIIFSS TGKLYDFASS SMKSVIDRYN KSKIEQQQLL NPASEVKFWQ REAAVLRQEL
101: HALQENHRQM MGEQLNGLSV NELNSLENQI EISLRGIRMR KNDCFSGFTG TTVDSRNPRT KPKEESYSSG KPRFI
101: HALQENHRQM MGEQLNGLSV NELNSLENQI EISLRGIRMR KNDCFSGFTG TTVDSRNPRT KPKEESYSSG KPRFI
Arabidopsis Description
AGL21Agamous-like MADS-box protein AGL21 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.