Factsheet for TraesCS7B01G009900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G002500.1	Wheat	mitochondrion, nucleus	39.57	79.57
HORVU5Hr1G000480.1	Barley	nucleus	78.07	76.84
TraesCS7B01G021100.1	Wheat	nucleus	18.18	51.52
TraesCS7B01G020900.1	Wheat	nucleus	17.65	47.83
TraesCS2B01G344000.1	Wheat	nucleus	50.8	39.58
TraesCS7B01G009500.1	Wheat	nucleus	48.66	39.57
TraesCS1B01G058200.1	Wheat	nucleus	47.06	39.46
TraesCS7B01G009800.1	Wheat	nucleus	48.13	39.13
TraesCS5B01G002400.1	Wheat	nucleus	46.52	37.5
TraesCS1B01G058300.1	Wheat	nucleus	47.06	37.29
TraesCS1B01G058100.1	Wheat	nucleus	47.59	36.63
TraesCS6B01G322700.2	Wheat	nucleus	47.06	36.51
TraesCS4B01G245700.1	Wheat	nucleus	34.22	29.63
TraesCS7B01G020800.1	Wheat	nucleus	34.76	28.63
TraesCS1B01G273300.1	Wheat	nucleus	37.43	27.45
TraesCS5B01G115100.1	Wheat	nucleus	36.36	26.98
TraesCS5B01G396700.1	Wheat	nucleus	33.69	26.69
TraesCS5B01G396600.2	Wheat	nucleus	34.76	25.9
TraesCS5B01G286100.2	Wheat	nucleus	34.22	25.4
TraesCS7B01G158600.1	Wheat	nucleus	33.16	25.2
TraesCS2B01G281000.1	Wheat	nucleus	36.36	24.82
TraesCS6B01G286400.1	Wheat	nucleus	34.22	24.71
TraesCS2B01G200800.1	Wheat	nucleus	34.76	24.34
TraesCS4B01G245800.1	Wheat	nucleus	31.55	23.89
TraesCS4B01G277800.1	Wheat	nucleus	31.55	23.89
TraesCS1B01G144800.1	Wheat	nucleus	33.69	23.42
TraesCS3B01G157500.4	Wheat	nucleus	34.76	20.97
TraesCS7B01G021000.1	Wheat	nucleus	20.32	20.32

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	PFAM:PF00319
PFAM:PF01486	PRINTS:PR00404	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF263
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	EnsemblPlantsGene:TraesCS7B01G009900
EnsemblPlants:TraesCS7B01G009900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:6081523..6082860

Molecular Weight (calculated)

21889.9 Da

IEP (calculated)

10.192

GRAVY (calculated)

-0.512

Length

187 amino acids

Sequence
(BLAST)

001: MVRGKIVIRR VENMSRRQVT FSKRRGGLLK KARELAILCN VQVGVIVFSS TCRLYEYANS TTATTMGTAM PSMIQNYQSS QEQHQLLNPV SQVMFWQGEV
101: QKLQQEMQML QEHHRKLMGE RLLNLGVKDL CLMENQLEKS LHRIREKKEQ SSTNHILQLN EKGCIFHQEN IRLSREIKLI HEQNLEL

Best Arabidopsis Sequence Match ( AT2G22630.1 )
(BLAST)

001: MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS SVKSTIERFN TAKMEEQELM NPASEVKFWQ REAETLRQEL
101: HSLQENYRQL TGVELNGLSV KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL YKKAYGTSNT NGLGHHELVD
201: AVYESHAQVR LQLSQPEQSH YKTSSNS

Arabidopsis Description

AGL17AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.