Factsheet for Zm00001d037045_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d033980_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21470.1	Zm00001d033980_P001	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91676	Sorghum	cytosol, nucleus, plastid	52.56	88.8
EER92955	Sorghum	plastid	52.56	88.13
Os10t0464400-01	Rice	cytosol	51.66	86.4
TraesCS1D01G144800.1	Wheat	cytosol	50.3	84.13
TraesCS1A01G146600.1	Wheat	cytosol	50.15	83.88
TraesCS1B01G164900.1	Wheat	cytosol	49.7	83.12
Os10t0209300-00	Rice	cytosol	10.54	81.4
GSMUA_Achr5P20490_001	Banana	cytosol	43.67	74.74
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	41.42	71.99
PGSC0003DMT400057721	Potato	cytosol	29.67	71.9
KRH41925	Soybean	cytosol	20.78	71.5
VIT_00s0181g00130.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	41.42	70.88
HORVU1Hr1G038850.2	Barley	plastid	51.05	69.47
KRH49951	Soybean	nucleus	38.86	68.44
VIT_00s0181g00140.t01	Wine grape	mitochondrion, plastid	41.42	68.41
Solyc02g079100.2.1	Tomato	extracellular	39.61	68.31
CDX79065	Canola	cytosol	38.7	67.81
AT4G21470.1	Thale cress	cytosol	38.25	67.02
CDX82826	Canola	cytosol	38.1	66.75
Zm00001d024155_P001	Maize	cytosol	11.9	32.11
Zm00001d012707_P003	Maize	cytosol	10.39	32.09
Zm00001d024413_P001	Maize	extracellular	12.35	29.6

Protein Annotations

KEGG:00740+2.7.1.26	Gene3D:1.10.150.240	Gene3D:1.25.40.10	EntrezGene:100280513	Gene3D:2.40.30.30	Gene3D:3.40.50.1000
MapMan:7.10.8	UniProt:A0A1D6LTG4	ProteinID:AQK82706.1	ProteinID:AQK82716.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008531
GO:GO:0009058	GO:GO:0009231	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR023198	InterPro:IPR023214	InterPro:IPR023465	PFAM:PF01535
PFAM:PF01687	PFAM:PF13419	InterPro:PGP-like_dom2	PRINTS:PR00413	PFscan:PS51375	PANTHER:PTHR22749
PANTHER:PTHR22749:SF1	InterPro:Pentatricopeptide_repeat	InterPro:Riboflavin_kinase	InterPro:Riboflavin_kinase_bac/euk	InterPro:Riboflavin_kinase_dom_sf	SMART:SM00904
SUPFAM:SSF56784	SUPFAM:SSF82114	TIGRFAMs:TIGR01509	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000844F253
EnsemblPlantsGene:Zm00001d037045	EnsemblPlants:Zm00001d037045_P004	EnsemblPlants:Zm00001d037045_T004	:	:	:

Description

Haloacid dehalogenase-like hydrolase domain-containing protein 1A isoform 1%3B Haloacid dehalogenase-like hydrolase domain-containing protein 1A isoform 2

Coordinates

chr6:-:110223819..110231082

Molecular Weight (calculated)

73464.6 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.130

Length

664 amino acids

Sequence
(BLAST)

001: MVFQQMLERD IIVWNAMIMG LGMIGHEKIA FVLVGQMKNS GVKLNDNTFI GLLCSCTHTS LVNDGRRYFH NMTHVYSISP RIEHYGCMVD LLSRAGLLEE
101: AHQLIGDMPM LANAVVWGAR LGGCKIHRNA DLAEYVLKQL TRLEPWNSGN YVMLSNIYSN SGRWEDAAKL RLEMKAKGIE KVAASSWVEL DDKVHKFYVG
201: DDSHPLSDKI YAKLDELGHG IPSFRSRRFT LANSAVSLPL SARPLSFGCV SQISCLFVAL DSSVVRMAAP KPISRLISHV ILDLDGTLLN TDSVVSKVVK
301: PFILKNGKTW DSKKAHKLVG KTPYEAAAVV LEDYGLPYST EEFLSMITPM FSEQWCNLKP LPGANRLIKH LKTNGVPTAL ASNSPRCNIE AKIFFQQGWK
401: ESFSAIVGGD EVEKGKPSPN IFLEAAKRMN CAPSNCLVIE DSLPGVTGGK AAEMHVIAVP SIPKKTAEFS SADEVINSLL DVRPEKWGLP PFNDWIEGTL
501: PIEPWFIGGP VIKGFGRGSK VLGIPTANLP AENFSDVVSE HTSGVYFGWA GLSTRGIYKM VMSIGWNPYF DNTEKTVEPW LLHNFGEDFY GEEVRLAIVG
601: YIRPEANFPS LESLIERIHE DGRVAEKALD LPMYAKYKDS PYLRNPSKHG SSTTGGTQSE MDSK

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.