Factsheet for HORVU1Hr1G038850.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G146600.1	Wheat	cytosol	78.07	95.97
TraesCS1B01G164900.1	Wheat	cytosol	77.87	95.72
TraesCS1D01G144800.1	Wheat	cytosol	77.66	95.47
Os10t0464400-01	Rice	cytosol	69.26	85.14
Os10t0209300-00	Rice	cytosol	14.96	84.88
EER92955	Sorghum	plastid	67.83	83.59
OQU91676	Sorghum	cytosol, nucleus, plastid	66.19	82.19
GSMUA_Achr5P20490_001	Banana	cytosol	59.84	75.26
PGSC0003DMT400057721	Potato	cytosol	42.01	74.82
KRH41925	Soybean	cytosol	28.89	73.06
VIT_00s0181g00130.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	57.79	72.68
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	56.76	72.51
Solyc02g079100.2.1	Tomato	extracellular	55.94	70.91
VIT_00s0181g00140.t01	Wine grape	mitochondrion, plastid	58.4	70.9
CDX79065	Canola	cytosol	54.1	69.66
KRH49951	Soybean	nucleus	53.28	68.97
CDX82826	Canola	cytosol	53.28	68.6
AT4G21470.1	Thale cress	cytosol	53.28	68.6
Zm00001d037045_P004	Maize	cytosol	69.47	51.05
HORVU3Hr1G072950.3	Barley	cytosol	30.74	34.64
HORVU3Hr1G109780.2	Barley	cytosol	17.01	25.78

Protein Annotations

KEGG:00740+2.7.1.26	Gene3D:1.10.150.240	Gene3D:2.40.30.30	Gene3D:3.40.50.1000	MapMan:7.10.8	UniProt:A0A287F713
EMBL:AK366455	EMBL:AK369956	EMBL:AK374913	EMBL:AK376753	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0003919	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008531
GO:GO:0009058	GO:GO:0009231	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	EnsemblPlantsGene:HORVU1Hr1G038850	EnsemblPlants:HORVU1Hr1G038850.2
InterPro:IPR023198	InterPro:IPR023214	InterPro:IPR023465	PFAM:PF01687	PFAM:PF13419	InterPro:PGP-like_dom2
PRINTS:PR00413	PANTHER:PTHR22749	PANTHER:PTHR22749:SF1	InterPro:Riboflavin_kinase	InterPro:Riboflavin_kinase_bac/euk	InterPro:Riboflavin_kinase_dom_sf
SMART:SM00904	SUPFAM:SSF56784	SUPFAM:SSF82114	TIGRFAMs:TIGR01509	UniParc:UPI000B464EA5	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:270476945..270483674

Molecular Weight (calculated)

53474.9 Da

IEP (calculated)

6.914

GRAVY (calculated)

-0.290

Length

488 amino acids

Sequence
(BLAST)

001: ERSRGPTSRP RPLPARARPP PLLGARARSP PPPLRSRSRL PRSSRPPVHP GSLAPSLPGQ GQGQPPPAVV SSGWASQIIC LLLHLAHPSL EMAAPKPITR
101: LISHVILDLD GTLLNTDCIV SQVLKPFLVK NGKRWDSKNA HKYVGKTPYE AAAVVLEDYG LPYSTEEFLS LINPMFSEQW GNLKALPGAN RLIKHLKSSR
201: VPAAIASNSS RSNIESKISC HQGWKEYFSA LVGADEVELG KPSPEIFLEA AKRMNADPSN CLVIEDSVPG VTAGKAAGMH VIAVPSVPKR TDEFSSADEI
301: INSLLDLKPE KWGLPPFNDW IEGTLPIDPW FIGGPVIKGF GRGSKVLGIP TANLAAENFS DILSEHTSGV YFGWAGLSKR GIYKMVMSIG WNPYFDNTEK
401: TIEPWLLHGF DEDFYGEELR LVIVGYIRPE ANFPSLESLI ERIHEDGRIA ENALDLPEYA KYKDSPYLRN PLQQGASADG NEAEPEFI

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.