CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21470.1	KRH31638	AT4G14640.1	17360592
AT4G21470.1	KRH69070	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057721	Potato	cytosol	79.79	56.2
KRH49951	Soybean	nucleus	94.3	48.28
AT4G21470.1	Thale cress	cytosol	81.35	41.42
CDX79065	Canola	cytosol	80.31	40.9
CDX82826	Canola	cytosol	80.31	40.9
Solyc02g079100.2.1	Tomato	extracellular	80.31	40.26
VIT_00s0181g00130.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	78.76	39.18
VIT_00s0181g00140.t01	Wine grape	mitochondrion, plastid	79.27	38.06
GSMUA_Achr5P20490_001	Banana	cytosol	75.65	37.63
TraesCS1A01G146600.1	Wheat	cytosol	73.58	35.77
TraesCS1D01G144800.1	Wheat	cytosol	73.06	35.52
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	69.95	35.34
TraesCS1B01G164900.1	Wheat	cytosol	72.02	35.01
Os10t0464400-01	Rice	cytosol	72.02	35.01
EER92955	Sorghum	plastid	69.95	34.09
OQU91676	Sorghum	cytosol, nucleus, plastid	68.91	33.84
HORVU1Hr1G038850.2	Barley	plastid	73.06	28.89
Zm00001d037045_P004	Maize	cytosol	71.5	20.78
KRH22289	Soybean	cytosol	24.35	12.91
KRH27040	Soybean	cytosol	24.35	12.88
KRH19024	Soybean	nucleus	5.7	4.56
Os10t0209300-00	Rice	cytosol	0.52	1.16

Protein Annotations

KEGG:00740+2.7.1.26	EntrezGene:100806927	Gene3D:2.40.30.30	MapMan:7.10.8	EMBL:ACUP02004781	EnsemblPlantsGene:GLYMA_08G058800
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008531	GO:GO:0009058
GO:GO:0009231	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1KQQ0
InterPro:IPR023465	ProteinID:KRH41924.1	EnsemblPlants:KRH41925	ProteinID:KRH41925	ProteinID:KRH41925.1	PFAM:PF01687
PANTHER:PTHR22749	PANTHER:PTHR22749:SF1	MetaCyc:PWY-5523	MetaCyc:PWY-6168	MetaCyc:PWY-7863	InterPro:Riboflavin_kinase
InterPro:Riboflavin_kinase_bac/euk	InterPro:Riboflavin_kinase_dom_sf	SMART:SM00904	SUPFAM:SSF82114	UniParc:UPI000294E532	:

Description

hypothetical protein

Coordinates

chr8:+:4492638..4495030

Molecular Weight (calculated)

21933.2 Da

IEP (calculated)

4.777

GRAVY (calculated)

-0.153

Length

193 amino acids

Sequence
(BLAST)

001: MEVVAVPSLP KQLHLYTAAD EVINSLLDLR LEKWGLPPFE DWVEGTLPLD PWYIVGPVVK GFGRDSKVLG IPTANLSTKG YSDLLSEHPA GVYFDWAGLS
101: ARGVFKMVMS IGWNPYFNNK EKTIEPWLLH DFNEDFYGEE LRLVIVGYIR PEANFPSLES LVAKIHEDRR VAERALDLPL YSSFKNDSYL RSS

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.