CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27040	Soybean	cytosol	90.66	90.41
VIT_12s0028g02210.t01	Wine grape	cytosol	56.32	55.56
VIT_12s0028g02200.t01	Wine grape	plastid	57.42	53.18
Os01t0757900-01	Rice	cytosol	26.92	50.0
PGSC0003DMT400052621	Potato	cytosol	50.55	48.04
Solyc07g053270.2.1	Tomato	cytosol	50.27	47.78
GSMUA_Achr4P10550_001	Banana	cytosol	47.25	45.03
EES03641	Sorghum	cytosol	43.41	42.93
TraesCS3B01G329400.2	Wheat	cytosol	43.68	41.19
TraesCS3A01G294800.1	Wheat	cytosol	42.58	41.11
TraesCS3D01G294900.3	Wheat	cytosol	43.41	40.51
KRH49951	Soybean	nucleus	39.56	38.2
HORVU3Hr1G072950.3	Barley	cytosol	44.23	37.18
TraesCS3A01G306900.1	Wheat	cytosol	39.84	35.98
Zm00001d012707_P003	Maize	cytosol	17.58	29.77
KRH19024	Soybean	nucleus	19.51	29.46
KRH41925	Soybean	cytosol	12.91	24.35

Protein Annotations

KEGG:00740+2.7.1.26	Gene3D:1.10.150.240	EntrezGene:100791323	Gene3D:2.40.30.30	Gene3D:3.40.50.1000	MapMan:35.1
EMBL:ACUP02008404	EnsemblPlantsGene:GLYMA_13G291000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008531	GO:GO:0009058	GO:GO:0009231	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198
InterPro:IPR023214	InterPro:IPR023465	UniProt:K7M2J5	EnsemblPlants:KRH22289	ProteinID:KRH22289	ProteinID:KRH22289.1
PFAM:PF13419	InterPro:PGP-like_dom2	PRINTS:PR00413	ScanProsite:PS01228	PANTHER:PTHR22749	PANTHER:PTHR22749:SF4
MetaCyc:PWY-5523	MetaCyc:PWY-6168	MetaCyc:PWY-7863	InterPro:Riboflavin_kinase	InterPro:Riboflavin_kinase_dom_sf	SUPFAM:SSF56784
TIGRFAMs:TIGR01509	UniParc:UPI000233BD6A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:39127484..39132434

Molecular Weight (calculated)

40682.0 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.188

Length

364 amino acids

Sequence
(BLAST)

001: MSCCCESKGC NEGAKVLAVI FDLDGTLLNT ERATRGVLNE FLARYGKELD REKEEKKRLG MTQKDSAAII VNDYELPLTP DQFIKEITPL YRERWAKAKA
101: LPGANRLVKH LQKNGVPMGL ASNSLREYVD AKISHHKGWK ESFSVILGSD QVKSGKPSPY LFEEAAKKIG VDAINCLVIE DSLVGVKAAN AAKMKIVAVP
201: SRREADCHGL ANVVLHSLLE FQPELWGLPP FDDWLDNTLP IDPIHLSGLY VSGCLEEATE NATLVFPDQA VGLYFGWAKV DTDGNFKILV SINIDFSCVG
301: YKRIHVYLID ANSDLKHKQK MQIHLVGYIR AWDNKEFTST ELEKLEEYKS IARASLYLPS FTCL

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.