Factsheet for TraesCS3D01G294900.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G329400.2	Wheat	cytosol	93.59	94.56
HORVU3Hr1G072950.3	Barley	cytosol	92.31	83.14
TraesCS3A01G306900.1	Wheat	cytosol	84.36	81.64
EES03641	Sorghum	cytosol	63.08	66.85
Os01t0757900-01	Rice	cytosol	33.08	65.82
Zm00001d012707_P003	Maize	cytosol	29.23	53.02
GSMUA_Achr4P10550_001	Banana	cytosol	51.03	52.09
KRH27040	Soybean	cytosol	41.54	44.38
KRH22289	Soybean	cytosol	40.51	43.41
PGSC0003DMT400052621	Potato	cytosol	42.05	42.82
Solyc07g053270.2.1	Tomato	cytosol	42.05	42.82
VIT_12s0028g02210.t01	Wine grape	cytosol	39.49	41.73
VIT_12s0028g02200.t01	Wine grape	plastid	40.51	40.2
TraesCS1D01G144800.1	Wheat	cytosol	38.21	37.53
TraesCS3D01G503200.1	Wheat	cytosol	20.77	33.2
TraesCS7D01G118300.1	Wheat	cytosol	18.46	29.39

Protein Annotations

Gene3D:1.10.150.240	Gene3D:2.40.30.30	Gene3D:3.40.50.1000	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008531	GO:GO:0009058	GO:GO:0009231	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	InterPro:IPR023465	PFAM:PF13419	InterPro:PGP-like_dom2	PRINTS:PR00413
PANTHER:PTHR18901	PANTHER:PTHR18901:SF37	InterPro:Riboflavin_kinase_dom_sf	SUPFAM:SSF56784	SUPFAM:SSF82114	TIGRFAMs:TIGR01509
TIGRFAMs:TIGR01549	EnsemblPlantsGene:TraesCS3D01G294900	EnsemblPlants:TraesCS3D01G294900.3	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:406401539..406404790

Molecular Weight (calculated)

42914.5 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.090

Length

390 amino acids

Sequence
(BLAST)

001: MAATHRVSAV IFDLDGTLLD TERATRDVLK EFLGTYGKVP DAAKEEKRLG QMHRESTTGI IADYGLPITV EEYSEAIYPL YIKRWQRARP LPGVNRLLKH
101: LHKNGVPLAL ASNSIRRNID HKILKLGELK DCFSVVLGGD QVPHGKPCPD IFLEAAKRLG VNPSSCLVIE DSLVGVQAAK ASGAKVVAVP SLQSQRHCYS
201: IADLILYSLL DFHPELWGLP PFEDRIQGAL AMEPLLSNAQ IGDAVQNSTL TLIAVFATGE CTYDSIPDQI SGIFFGWTKS ETSGVFKAVV STGWDLSPGK
301: FERVMHICFL DSHYKAKTED HLELLLIGYI RKLQSSENIS QAMNITDEDQ ATARDALDLP AFSEYAKTRS ALDLPALPEY AEPRNGLLLA

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.