Factsheet for GSMUA_Achr4P10550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G329400.2	Wheat	cytosol	52.09	51.55
EES03641	Sorghum	cytosol	49.21	51.09
TraesCS3D01G294900.3	Wheat	cytosol	52.09	51.03
TraesCS3A01G294800.1	Wheat	cytosol	49.74	50.4
Os01t0757900-01	Rice	cytosol	25.39	49.49
KRH22289	Soybean	cytosol	45.03	47.25
VIT_12s0028g02210.t01	Wine grape	cytosol	45.55	47.15
KRH27040	Soybean	cytosol	45.03	47.12
HORVU3Hr1G072950.3	Barley	cytosol	52.88	46.65
VIT_12s0028g02200.t01	Wine grape	plastid	46.07	44.78
TraesCS3A01G306900.1	Wheat	cytosol	46.86	44.42
GSMUA_Achr5P20490_001	Banana	cytosol	43.72	43.04
PGSC0003DMT400052621	Potato	cytosol	42.93	42.82
Solyc07g053270.2.1	Tomato	cytosol	42.15	42.04
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	40.31	40.31
Zm00001d012707_P003	Maize	cytosol	22.51	40.0
GSMUA_Achr9P22850_001	Banana	mitochondrion	20.68	33.05

Protein Annotations

KEGG:00740+2.7.1.26	Gene3D:1.10.150.240	Gene3D:2.40.30.30	Gene3D:3.40.50.1000	MapMan:7.10.8	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008531	GO:GO:0009058	GO:GO:0009231
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G10550_001
EnsemblPlants:GSMUA_Achr4P10550_001	EnsemblPlants:GSMUA_Achr4T10550_001	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198
InterPro:IPR023214	InterPro:IPR023465	UniProt:M0SMS2	PFAM:PF13419	InterPro:PGP-like_dom2	PRINTS:PR00413
PANTHER:PTHR22749	PANTHER:PTHR22749:SF4	InterPro:Riboflavin_kinase	InterPro:Riboflavin_kinase_dom_sf	SUPFAM:SSF56784	SUPFAM:SSF82114
TIGRFAMs:TIGR01509	UniParc:UPI000295122D	:	:	:	:

Description

Putative Haloacid dehalogenase-like hydrolase domain-containing protein 1A [Source:GMGC_GENE;Acc:GSMUA_Achr4G10550_001]

Coordinates

chr4:+:7666204..7671960

Molecular Weight (calculated)

41947.3 Da

IEP (calculated)

4.758

GRAVY (calculated)

0.022

Length

382 amino acids

Sequence
(BLAST)

001: MGADRISAVI LDLDGTLLDT ERATGGILEE FLARHGKALD AAMEEKRLGK MHKESAAAIV QDYGLPMTPE EFSEAIMPLF QERWPQAKAL PGVNRLIKHL
101: HNHGIPLALA SNSIREHIGI KISYQQGWKE SFSVILGGDD VSHGKPSPDI FLEAAKRLGV DISKCLVIED SLVGVRGAKD AGAEVVAVPS LQGQDENYSI
201: ANCLLHTLLE FQPELWGLPA FEDGLQSALP IEPLFIGGLG GEVVSYDGFS KIDITAGKEN WYFAYTGSYE FIPHQVWGVF IGWANIEMHG IYKVVICIGW
301: DTSSGAAKRV ILPYLIDHTE SHKNERLQLF IVGYVRKLQN EGTMSEALRV FEEDVNIARA ALDIPVFSLP TSSSLFVEAA FD

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.