Factsheet for GSMUA_Achr9P22850_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
nucleus 1
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G495800.1	Wheat	cytosol	72.8	71.9
TraesCS3D01G503200.1	Wheat	cytosol	72.38	70.9
Os08t0243600-01	Rice	cytosol, nucleus	70.71	70.42
Bra002728.1-P	Field mustard	cytosol	68.2	68.49
CDY38298	Canola	cytosol	68.2	68.49
KRH19024	Soybean	nucleus	68.2	67.63
TraesCS7D01G118300.1	Wheat	cytosol	68.62	66.94
VIT_11s0052g00860.t01	Wine grape	cytosol	64.85	66.24
Bra019139.1-P	Field mustard	cytosol	67.36	65.98
AT5G57440.1	Thale cress	cytosol	66.11	65.83
Zm00001d024155_P001	Maize	cytosol	65.27	63.41
CDY57289	Canola	cytosol	31.38	62.5
Zm00001d024413_P001	Maize	extracellular	72.38	62.45
EES13604	Sorghum	cytosol	63.6	62.3
Solyc10g054280.1.1	Tomato	cytosol	64.02	62.2
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	72.8	61.48
KXG24804	Sorghum	plastid	72.38	59.04
TraesCS7B01G017100.1	Wheat	plastid	69.04	57.69
CDY42776	Canola	mitochondrion	67.36	55.71
CDY42775	Canola	mitochondrion	67.36	55.71
CDY25908	Canola	cytosol	64.44	55.2
CDX92735	Canola	mitochondrion	67.36	55.14
AT4G25840.1	Thale cress	mitochondrion	67.36	54.03
HORVU3Hr1G109780.2	Barley	cytosol	71.97	53.42
PGSC0003DMT400062819	Potato	mitochondrion	42.26	48.1
GSMUA_Achr4P10550_001	Banana	cytosol	33.05	20.68
GSMUA_Achr5P20490_001	Banana	cytosol	31.8	19.59
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	27.2	17.02

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:5.7.4.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr9G22850_001	EnsemblPlants:GSMUA_Achr9P22850_001	EnsemblPlants:GSMUA_Achr9T22850_001	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	UniProt:M0U2P4	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI000294F242

Description

Putative Haloacid dehalogenase-like hydrolase domain-containing protein 1A [Source:GMGC_GENE;Acc:GSMUA_Achr9G22850_001]

Coordinates

chr9:+:27899587..27902608

Molecular Weight (calculated)

26358.1 Da

IEP (calculated)

6.034

GRAVY (calculated)

-0.105

Length

239 amino acids

Sequence
(BLAST)

001: MATPLLPRVR APITHVIFDM DGLLLDTEPF YTLVQEKILA RFGKTFDWSL KAQMMGKKAI ESARIFVRES GLDGLLTPEA FLEEREGMLQ DLFPTCQQLP
101: GVKRLVSHLH AKGIPMCIAT GSHKRHFALK TQNHGEIIAM MHHVVMGDDP EVTKGKPSPE VFLAAAKRFE GSVDLSKVLV FEDAPSGVAA AKNAGMNVIM
201: VPDPCLDASH QKEADQVLGS LMDFEPKEWG LPPFDPSNE

Best Arabidopsis Sequence Match ( AT5G57440.1 )
(BLAST)

001: MSNPAAVTAG RGSITHVIFD MDGLLLDTEK FYTEVQEIIL ARFNKKFDWS LKAKMMGRKA IEAARIFVEE SGISDSLSAE DFLVERESML QDLFPTSELM
101: PGASRLIKHL HVKNIPICIA TGTHTRHYDL KTQRHRELFS LMHHVVRGDD PEVKQGKPAP DGFLAAARRF KDGPVDSQKV LVFEDAPSGV LAAKNAGMNV
201: VMVPDPRLDI SHQDVADQII TSLVDFKPEE WGLPPFEDSN

Arabidopsis Description

GPP2(DL)-glycerol-3-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.