Factsheet for TraesCS3A01G495800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G503200.1	Wheat	cytosol	91.74	90.98
Os08t0243600-01	Rice	cytosol, nucleus	85.95	86.67
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	94.21	80.57
Zm00001d024413_P001	Maize	extracellular	84.3	73.65
EES13604	Sorghum	cytosol	73.97	73.36
GSMUA_Achr9P22850_001	Banana	mitochondrion	71.9	72.8
VIT_11s0052g00860.t01	Wine grape	cytosol	69.42	71.79
Zm00001d024155_P001	Maize	cytosol	72.73	71.54
KXG24804	Sorghum	plastid	84.3	69.62
HORVU3Hr1G109780.2	Barley	cytosol	91.32	68.63
Bra002728.1-P	Field mustard	cytosol	66.53	67.65
CDY38298	Canola	cytosol	66.53	67.65
Solyc10g054280.1.1	Tomato	cytosol	67.36	66.26
KRH19024	Soybean	nucleus	65.7	65.98
Bra019139.1-P	Field mustard	cytosol	65.7	65.16
AT5G57440.1	Thale cress	cytosol	64.05	64.58
CDY57289	Canola	cytosol	31.82	64.17
CDY25908	Canola	cytosol	64.05	55.56
CDY42776	Canola	mitochondrion	66.12	55.36
CDY42775	Canola	mitochondrion	66.12	55.36
CDX92735	Canola	mitochondrion	66.53	55.14
AT4G25840.1	Thale cress	mitochondrion	65.7	53.36
PGSC0003DMT400062819	Potato	mitochondrion	46.28	53.33
TraesCS3A01G294800.1	Wheat	cytosol	31.82	20.42
TraesCS3A01G306900.1	Wheat	cytosol	31.82	19.11
TraesCS1A01G146600.1	Wheat	cytosol	30.99	18.89

Protein Annotations

EnsemblPlants:TraesCS3A01G495800.1	EnsemblPlantsGene:TraesCS3A01G495800	Gene3D:1.10.150.240	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	PFAM:PF13419
SUPFAM:SSF56784	TIGR:cd07529	TIGRFAMs:TIGR01509	MapMan:5.7.4.1	:	:

Description

No Description!

Coordinates

chr3A:-:721581893..721584058

Molecular Weight (calculated)

26582.0 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.106

Length

242 amino acids

Sequence
(BLAST)

001: MASVDAGEGQ AAPAPRATVS HVIFDMDGLL LDTEGFYTEV QEKILARYGK VFDWSLKAKM MGKKAAESAR IFVDECGLAG LLTPEQFLEE REGMLQELFP
101: SCAVLPGVVR LIHHLHANEI PICVATGSHK RHFALKTQNH QEMFALMHHV VMGDDPEVKA GKPSPDIFLA AMRRFEGNVE PSKCLVFEDA PSGVGAAKNA
201: GMYAVMVPDP RLDVSYQKDA DQVLSSLLDF NPTEWGLPPF KE

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.