Factsheet for Zm00001d024413_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0243600-01	Rice	cytosol, nucleus	74.73	86.25
TraesCS3D01G503200.1	Wheat	cytosol	75.09	85.25
TraesCS3A01G495800.1	Wheat	cytosol	73.65	84.3
TraesCS7D01G118300.1	Wheat	cytosol	69.31	78.37
KXG24804	Sorghum	plastid	81.59	77.13
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	75.81	74.2
Zm00001d024155_P001	Maize	cytosol	64.98	73.17
GSMUA_Achr9P22850_001	Banana	mitochondrion	62.45	72.38
VIT_11s0052g00860.t01	Wine grape	cytosol	59.57	70.51
TraesCS7B01G017100.1	Wheat	plastid	71.48	69.23
KRH19024	Soybean	nucleus	59.21	68.05
Solyc10g054280.1.1	Tomato	cytosol	59.93	67.48
CDY38298	Canola	cytosol	57.76	67.23
Bra002728.1-P	Field mustard	cytosol	57.76	67.23
Bra019139.1-P	Field mustard	cytosol	59.21	67.21
CDY57289	Canola	cytosol	28.88	66.67
HORVU3Hr1G109780.2	Barley	cytosol	74.73	64.29
AT5G57440.1	Thale cress	cytosol	55.6	64.17
CDX92735	Canola	mitochondrion	60.65	57.53
CDY42776	Canola	mitochondrion	59.93	57.44
CDY42775	Canola	mitochondrion	59.93	57.44
AT4G25840.1	Thale cress	mitochondrion	61.01	56.71
CDY25908	Canola	cytosol	55.96	55.56
PGSC0003DMT400062819	Potato	mitochondrion	40.79	53.81
Zm00001d037045_P004	Maize	cytosol	29.6	12.35
Zm00001d012707_P003	Maize	cytosol	7.22	9.3

Protein Annotations

Gene3D:1.10.150.240	EntrezGene:100283340	Gene3D:3.40.50.1000	MapMan:5.7.4.1	ProteinID:AQK41145.1	UniProt:B4FTM3
EMBL:BT040461	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	PFAM:PF13419
InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI00017B78E7
EnsemblPlantsGene:Zm00001d024413	EnsemblPlants:Zm00001d024413_P001	EnsemblPlants:Zm00001d024413_T001	:	:	:

Description

(DL)-glycerol-3-phosphatase 2

Coordinates

chr10:-:69712467..69715466

Molecular Weight (calculated)

30220.6 Da

IEP (calculated)

6.958

GRAVY (calculated)

-0.156

Length

277 amino acids

Sequence
(BLAST)

001: MRTPIGNPPK IPFSQSPLPV PDLVHSHSRN PAAPRLMASC GAGDAASAQP RASISHVIFD MDGLLLDTEG FYTEVQEKIL ARYDKVFDWS LKAKMMGKKA
101: AESARIFVDE CGLNGLLTPE QFLEERESML QALFPSCTKL PGVLRLVHHL HANGVPMAVA TGSHKRHFAL KTQNHQEMFS LMHHVVMGDD PEVKAGKPSP
201: DIFLAAMRRF EGGVEPSKCL VFEDAPSGVA AAKNAGMSVV MVPDPRLDVS YHKGADQVLS SLLDFKPAEW GLPAFKE

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.