Factsheet for TraesCS3B01G559400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G495800.1	Wheat	cytosol	80.57	94.21
TraesCS3D01G503200.1	Wheat	cytosol	79.15	91.8
Os08t0243600-01	Rice	cytosol, nucleus	72.79	85.83
Zm00001d024413_P001	Maize	extracellular	74.2	75.81
EES13604	Sorghum	cytosol	63.96	74.18
GSMUA_Achr9P22850_001	Banana	mitochondrion	61.48	72.8
TraesCS7B01G017100.1	Wheat	plastid	73.5	72.73
HORVU3Hr1G109780.2	Barley	cytosol	82.69	72.67
KXG24804	Sorghum	plastid	74.91	72.35
VIT_11s0052g00860.t01	Wine grape	cytosol	59.36	71.79
Zm00001d024155_P001	Maize	cytosol	61.84	71.14
Bra002728.1-P	Field mustard	cytosol	57.24	68.07
CDY38298	Canola	cytosol	57.24	68.07
Solyc10g054280.1.1	Tomato	cytosol	57.24	65.85
KRH19024	Soybean	nucleus	55.83	65.56
Bra019139.1-P	Field mustard	cytosol	56.18	65.16
AT5G57440.1	Thale cress	cytosol	54.77	64.58
CDY57289	Canola	cytosol	27.21	64.17
CDX92735	Canola	mitochondrion	58.3	56.51
CDY25908	Canola	cytosol	55.12	55.91
CDY42776	Canola	mitochondrion	56.54	55.36
CDY42775	Canola	mitochondrion	56.54	55.36
AT4G25840.1	Thale cress	mitochondrion	57.6	54.7
PGSC0003DMT400062819	Potato	mitochondrion	39.58	53.33
TraesCS3B01G329400.2	Wheat	cytosol	27.92	20.47
TraesCS1B01G164900.1	Wheat	cytosol	26.86	19.14

Protein Annotations

EnsemblPlants:TraesCS3B01G559400.1	EnsemblPlantsGene:TraesCS3B01G559400	Gene3D:1.10.150.240	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	PFAM:PF13419
SUPFAM:SSF56784	TIGR:cd07529	TIGRFAMs:TIGR01509	MapMan:5.7.4.1	:	:

Description

No Description!

Coordinates

chr3B:+:793263736..793265999

Molecular Weight (calculated)

31108.7 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.177

Length

283 amino acids

Sequence
(BLAST)

001: MFQAARAQLG GAIIRSAGRA QQPREIRTPK SPRSLSLPRA PMASVDAGEG QAAPAPRATV SHVIFDMDGL LLDTEGFYTE VQERILARYG KVFDWSLKAK
101: MMGKKAMESA RIFVDECGLA GLLTPEQFLE EREGMLQELF PSCAVLPGVV RLIHHLHANE IPICVATGSH KRHFALKTQN HQEMFALMHH VVMGDDPEVK
201: AGKPSPDIFL AAMRRFEGNV EPSKCLVFED APSGVGAAKN AGMYAVMVPD PRLDVSYQKE ADQVLSSLLD FNPTEWGLPP FKE

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.