CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0243600-01	Rice	cytosol, nucleus	70.65	86.25
TraesCS3D01G503200.1	Wheat	cytosol	70.31	84.43
TraesCS3A01G495800.1	Wheat	cytosol	69.62	84.3
Zm00001d024413_P001	Maize	extracellular	77.13	81.59
TraesCS7D01G118300.1	Wheat	cytosol	63.82	76.33
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	72.35	74.91
GSMUA_Achr9P22850_001	Banana	mitochondrion	59.04	72.38
EES13604	Sorghum	cytosol	60.07	72.13
VIT_11s0052g00860.t01	Wine grape	cytosol	55.97	70.09
TraesCS7B01G017100.1	Wheat	plastid	66.21	67.83
KRH19024	Soybean	nucleus	53.58	65.15
Bra002728.1-P	Field mustard	cytosol	52.9	65.13
CDY38298	Canola	cytosol	52.9	65.13
Solyc10g054280.1.1	Tomato	cytosol	54.27	64.63
Bra019139.1-P	Field mustard	cytosol	53.58	64.34
HORVU3Hr1G109780.2	Barley	cytosol	69.28	63.04
AT5G57440.1	Thale cress	cytosol	51.54	62.92
CDY57289	Canola	cytosol	25.6	62.5
CDX92735	Canola	mitochondrion	55.97	56.16
CDY42776	Canola	mitochondrion	54.95	55.71
CDY42775	Canola	mitochondrion	54.95	55.71
AT4G25840.1	Thale cress	mitochondrion	55.29	54.36
CDY25908	Canola	cytosol	50.85	53.41
PGSC0003DMT400062819	Potato	mitochondrion	37.2	51.9
EES03641	Sorghum	cytosol	27.3	21.74
EER92955	Sorghum	plastid	28.33	20.96
OQU91676	Sorghum	cytosol, nucleus, plastid	26.28	19.59

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:5.7.4.1	UniProt:A0A1B6PGH6	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	EnsemblPlants:KXG24804	ProteinID:KXG24804	ProteinID:KXG24804.1	ProteinID:OQU80149.1
PFAM:PF13419	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	EnsemblPlantsGene:SORBI_3007G088200	SUPFAM:SSF56784
TIGRFAMs:TIGR01509	UniParc:UPI00081AB53A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:12106405..12112669

Molecular Weight (calculated)

31907.8 Da

IEP (calculated)

8.835

GRAVY (calculated)

-0.166

Length

293 amino acids

Sequence
(BLAST)

001: MPFPSLKSPV WSAGVTGKKR MRTPIGIHQR FPSPSRPAQI SLTRTRSPRP MASAGTGAGD GAAAQPKAAI SHVIFDMDGL LLDTEGFYTE VQEKILARYG
101: KVFDWSLKAK MMGKKATESA RIFVDECGLN GLLTPEEFLE ERESMLQALF PSCTKLPGVL RLVHHLHANG IPMAVATGSH KRHFALKTQN HQEMFALMHH
201: VVMGDDPEVK AGKPSPDIFL AAMRRFEGDI EPSKCLVFED APAGVAAAKN AGMSAVMVPD PRLDVSYQKG ADQVLSSLLD FKPTEWGLPA FSI

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.