CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002728.1-P	Field mustard	cytosol	81.72	95.8
CDY38298	Canola	cytosol	81.72	95.8
AT5G57440.1	Thale cress	cytosol	75.27	87.5
Solyc10g054280.1.1	Tomato	cytosol	66.31	75.2
VIT_11s0052g00860.t01	Wine grape	cytosol	62.72	74.79
CDY57289	Canola	cytosol	31.18	72.5
KRH19024	Soybean	nucleus	61.65	71.37
CDY42775	Canola	mitochondrion	68.46	66.09
CDY42776	Canola	mitochondrion	68.46	66.09
CDX92735	Canola	mitochondrion	68.82	65.75
GSMUA_Achr9P22850_001	Banana	mitochondrion	55.2	64.44
TraesCS3D01G503200.1	Wheat	cytosol	56.27	64.34
TraesCS3A01G495800.1	Wheat	cytosol	55.56	64.05
Os08t0243600-01	Rice	cytosol, nucleus	54.12	62.92
TraesCS7D01G118300.1	Wheat	cytosol	51.97	59.18
Zm00001d024155_P001	Maize	cytosol	51.25	58.13
EES13604	Sorghum	cytosol	50.54	57.79
Zm00001d024413_P001	Maize	extracellular	55.56	55.96
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	55.91	55.12
PGSC0003DMT400062819	Potato	mitochondrion	40.5	53.81
TraesCS7B01G017100.1	Wheat	plastid	52.33	51.05
KXG24804	Sorghum	plastid	53.41	50.85
HORVU3Hr1G109780.2	Barley	cytosol	55.91	48.45
CDX82826	Canola	cytosol	21.86	16.09
CDX79065	Canola	cytosol	21.86	16.09

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:5.7.4.1	GO:A0A078GMS1	UniProt:A0A078GMS1	EnsemblPlants:CDY25908
ProteinID:CDY25908	ProteinID:CDY25908.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00033387001	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198
InterPro:IPR023214	PFAM:PF13419	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	SUPFAM:SSF56784
TIGRFAMs:TIGR01509	UniParc:UPI0004EE8D4A	SEG:seg	:	:	:

Description

BnaC09g32800DBnaC09g32800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMS1]

Coordinates

chrLK032182:+:388589..391670

Molecular Weight (calculated)

31393.6 Da

IEP (calculated)

6.000

GRAVY (calculated)

-0.313

Length

279 amino acids

Sequence
(BLAST)

001: MSTPATAGRG SITHVIFDMD GLLLDTEKFY TEVQEIILAR FNKTFDWSLK AKMMGRKAIE AARIFVDESG ISDSLSAEDF LVEREAMLQE LFPTSELMPG
101: ASRLIKHLHA KNIPICIATG THTRHFDLKT QRHKELFSLM HHIVRGDDPE VKQGKPAPDG FLAASRRFKD GPVDPQKVLV FEDAPSGVLA AKNARMNVVM
201: VPDPRLDISH QDVADQIMTS LLDFKPEEWA KDWSVGKEFK ELILVYVVTF EWDGLTKMGQ DYSYSQPSSS SNSRHDLPS

Best Arabidopsis Sequence Match ( AT5G57440.1 )
(BLAST)

001: MSNPAAVTAG RGSITHVIFD MDGLLLDTEK FYTEVQEIIL ARFNKKFDWS LKAKMMGRKA IEAARIFVEE SGISDSLSAE DFLVERESML QDLFPTSELM
101: PGASRLIKHL HVKNIPICIA TGTHTRHYDL KTQRHRELFS LMHHVVRGDD PEVKQGKPAP DGFLAAARRF KDGPVDSQKV LVFEDAPSGV LAAKNAGMNV
201: VMVPDPRLDI SHQDVADQII TSLVDFKPEE WGLPPFEDSN

Arabidopsis Description

GPP2(DL)-glycerol-3-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.