Factsheet for PGSC0003DMT400062819

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 4
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57289	Canola	cytosol	40.48	70.83
Solyc10g054280.1.1	Tomato	cytosol	68.1	58.13
Bra019139.1-P	Field mustard	cytosol	57.14	49.18
Bra002728.1-P	Field mustard	cytosol	55.24	48.74
CDY38298	Canola	cytosol	55.24	48.74
VIT_11s0052g00860.t01	Wine grape	cytosol	53.33	47.86
KRH19024	Soybean	nucleus	53.33	46.47
TraesCS3D01G503200.1	Wheat	cytosol	53.81	46.31
TraesCS3A01G495800.1	Wheat	cytosol	53.33	46.28
AT5G57440.1	Thale cress	cytosol	52.86	46.25
Os08t0243600-01	Rice	cytosol, nucleus	52.38	45.83
EES13604	Sorghum	cytosol	51.9	44.67
TraesCS7D01G118300.1	Wheat	cytosol	51.9	44.49
Zm00001d024155_P001	Maize	cytosol	50.95	43.5
GSMUA_Achr9P22850_001	Banana	mitochondrion	48.1	42.26
CDY42775	Canola	mitochondrion	57.14	41.52
CDY42776	Canola	mitochondrion	57.14	41.52
CDX92735	Canola	mitochondrion	57.62	41.44
Zm00001d024413_P001	Maize	extracellular	53.81	40.79
CDY25908	Canola	cytosol	53.81	40.5
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	53.33	39.58
TraesCS7B01G017100.1	Wheat	plastid	52.86	38.81
AT4G25840.1	Thale cress	mitochondrion	54.29	38.26
KXG24804	Sorghum	plastid	51.9	37.2
HORVU3Hr1G109780.2	Barley	cytosol	54.76	35.71
PGSC0003DMT400057721	Potato	cytosol	19.52	14.96
PGSC0003DMT400052621	Potato	cytosol	25.24	13.84

Protein Annotations

EnsemblPlants:PGSC0003DMT400062819	EnsemblPlantsGene:PGSC0003DMG400024453	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	PFAM:PF13419	PGSC:PGSC0003DMG400024453	SUPFAM:SSF56784	TIGRFAMs:TIGR01509
UniParc:UPI000295EF78	UniProt:M1C9K6	MapMan:5.7.4.1	:	:	:

Description

Glycerol-3-phosphatase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400024453]

Coordinates

chr7:-:13304903..13309286

Molecular Weight (calculated)

23171.9 Da

IEP (calculated)

6.738

GRAVY (calculated)

-0.009

Length

210 amino acids

Sequence
(BLAST)

001: MMRVRLGTNN GLRVYPLVDC GIHFRDGTPF AANMRNDFQR FHFTPTIALY TRISLLVLTI CPVIGASRLI HHLHENGIPI CVATGTHTRH FDLKTQRHSE
101: LFSLMHHIVR GDDPEVKQGK PSPDIFLAAA NRFEGGPVDP QIILVFEDAP SGVLAAKNAG MSVVMVPDAR LDSSYHQVAD QVLNSLLDFS PDDWGLPPLE
201: NASTNSISLV

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.