CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024155_P001	Maize	cytosol	87.3	86.59
TraesCS3A01G495800.1	Wheat	cytosol	73.36	73.97
TraesCS3D01G503200.1	Wheat	cytosol	73.36	73.36
TraesCS7D01G118300.1	Wheat	cytosol	71.72	71.43
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	74.18	63.96
GSMUA_Achr9P22850_001	Banana	mitochondrion	62.3	63.6
VIT_11s0052g00860.t01	Wine grape	cytosol	60.66	63.25
KRH19024	Soybean	nucleus	61.48	62.24
Solyc10g054280.1.1	Tomato	cytosol	62.7	62.2
CDY57289	Canola	cytosol	30.33	61.67
Bra002728.1-P	Field mustard	cytosol	59.84	61.34
CDY38298	Canola	cytosol	59.84	61.34
Bra019139.1-P	Field mustard	cytosol	60.66	60.66
TraesCS7B01G017100.1	Wheat	plastid	70.9	60.49
KXG24804	Sorghum	plastid	72.13	60.07
AT5G57440.1	Thale cress	cytosol	59.02	60.0
HORVU3Hr1G109780.2	Barley	cytosol	74.59	56.52
PGSC0003DMT400062819	Potato	mitochondrion	44.67	51.9
CDY42776	Canola	mitochondrion	60.25	50.87
CDY42775	Canola	mitochondrion	60.25	50.87
CDX92735	Canola	mitochondrion	60.66	50.68
CDY25908	Canola	cytosol	57.79	50.54
AT4G25840.1	Thale cress	mitochondrion	59.84	48.99
EER92955	Sorghum	plastid	32.79	20.2
EES03641	Sorghum	cytosol	30.33	20.11
OQU91676	Sorghum	cytosol, nucleus, plastid	31.15	19.34

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:5.7.4.1	EntrezGene:8073254	UniProt:C5YJJ3	EnsemblPlants:EES13604
ProteinID:EES13604	ProteinID:EES13604.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006114	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0043136	InterPro:HAD-SF_hydro_IA
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023198	InterPro:IPR023214	PFAM:PF13419	InterPro:PGP-like_dom2
PANTHER:PTHR18901	PANTHER:PTHR18901:SF38	EnsemblPlantsGene:SORBI_3007G090200	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI0001A87C2A
RefSeq:XP_002444109.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:12934056..12936196

Molecular Weight (calculated)

27138.8 Da

IEP (calculated)

5.124

GRAVY (calculated)

-0.094

Length

244 amino acids

Sequence
(BLAST)

001: MPSADAGDTM PAQAPETRAV ISHVIFDMDG LLLDTEGFYT TMQEKILERY GKVFDWSVKA KMMGKTTAES TRILFEEFDL SRLLTPEQFL EEREIMLQML
101: LPTCVAMPGV ERLIHLLHTN GIPIAVATGT HKHHFALKTQ NHQDIFSLMH HIVTGDDPEV KAGKPSPDIF LAAMRRFEGN VEPSNCLVFE DAPLGVAAAK
201: TSGMHVVMVP DSRLDVSHHK GADQVLTSLL EFNPSEWGLP PFMD

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.