CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42776	Canola	mitochondrion	100.0	100.0
Bra019139.1-P	Field mustard	cytosol	80.97	95.9
CDY57289	Canola	cytosol	37.37	90.0
CDY38298	Canola	cytosol	68.51	83.19
CDX92735	Canola	mitochondrion	82.35	81.51
Solyc10g054280.1.1	Tomato	cytosol	65.74	77.24
VIT_11s0052g00860.t01	Wine grape	cytosol	61.59	76.07
AT4G25840.1	Thale cress	mitochondrion	77.85	75.5
KRH19024	Soybean	nucleus	60.21	72.2
CDY25908	Canola	cytosol	66.09	68.46
GSMUA_Achr9P22850_001	Banana	mitochondrion	55.71	67.36
TraesCS3A01G495800.1	Wheat	cytosol	55.36	66.12
Os08t0243600-01	Rice	cytosol, nucleus	54.67	65.83
TraesCS3D01G503200.1	Wheat	cytosol	55.36	65.57
Zm00001d024155_P001	Maize	cytosol	51.9	60.98
TraesCS7D01G118300.1	Wheat	cytosol	51.56	60.82
EES13604	Sorghum	cytosol	50.87	60.25
Zm00001d024413_P001	Maize	extracellular	57.44	59.93
PGSC0003DMT400062819	Potato	mitochondrion	41.52	57.14
TraesCS3B01G559400.1	Wheat	mitochondrion, plastid	55.36	56.54
KXG24804	Sorghum	plastid	55.71	54.95
TraesCS7B01G017100.1	Wheat	plastid	52.94	53.5
HORVU3Hr1G109780.2	Barley	cytosol	55.71	50.0
CDX82826	Canola	cytosol	23.88	18.21
CDX79065	Canola	cytosol	23.88	18.21

Protein Annotations

Gene3D:1.10.150.240	Gene3D:3.40.50.1000	MapMan:5.7.4.1	GO:A0A078HWB5	UniProt:A0A078HWB5	EnsemblPlants:CDY42775
ProteinID:CDY42775	ProteinID:CDY42775.1	ProteinID:CDY42776.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00075332001	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	PFAM:PF13419	InterPro:PGP-like_dom2	PANTHER:PTHR18901	PANTHER:PTHR18901:SF38
SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI0004EE97D5	:	:	:

Description

BnaA03g47640DBnaA03g47630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWB5]

Coordinates

chrLK032533:-:262931..264673

Molecular Weight (calculated)

31979.5 Da

IEP (calculated)

7.305

GRAVY (calculated)

-0.219

Length

289 amino acids

Sequence
(BLAST)

001: MLASPTRFVA QRITLRSSNT IPTSFIPPFP RGLPQRSVTK ASVAAMSTTS VNAVTDAGRG SITHVIFDMD GLLLDTEKFY TEVQEKILAR YNKTFDWSLK
101: AKMMGRKAIE AATLFVEECG ISDSLSPEAF IVERESMLQD LFPTSDLMPG ASRLLRHLHG KGIPICVATG THTRHFDLKT QRHRELFSLM HHIVRGDDPE
201: VKQGKPAPDG FLAAARRFED GPVDPRKALV FEDAPSGVMA AKNAGMNVIM VPDPRLDKSY CTVADQVLAS LLHFKPEEWG LPPFEDSQN

Best Arabidopsis Sequence Match ( AT4G25840.1 )
(BLAST)

001: MLTTPTRFVA LRIPFRSSNK IPISIAPSPK VFPRKPVIRV PASLRFVATM STPAAAVNAT VTVTDAGRGS ITHVIFDMDG LLLDTEKFYT EVQEKILARY
101: NKTFDWSLKA KMMGRKAIEA ARLFVDESGI SDSLSAEDFI VERESMLQDL FPTSDLMPGA SRLLRHLHGK GIPICIATGT HTRHFDLKTQ RHRELFSLMH
201: HVVRGDDPEV KEGKPAPDGF LAASRRFEDG PVDPRKVLVF EDAPSGVQAA KNAGMNVIMV PDSRLDKSYC NVADQVLASL LDFKPEEWGL PSFQDSHN

Arabidopsis Description

GPP1(DL)-glycerol-3-phosphatase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JTE7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.