CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22289	Soybean	cytosol	90.41	90.66
VIT_12s0028g02210.t01	Wine grape	cytosol	56.16	55.56
VIT_12s0028g02200.t01	Wine grape	plastid	56.71	52.67
Os01t0757900-01	Rice	cytosol	27.12	50.51
PGSC0003DMT400052621	Potato	cytosol	50.41	48.04
Solyc07g053270.2.1	Tomato	cytosol	49.86	47.52
GSMUA_Achr4P10550_001	Banana	cytosol	47.12	45.03
EES03641	Sorghum	cytosol	43.01	42.66
TraesCS3A01G294800.1	Wheat	cytosol	43.29	41.91
TraesCS3B01G329400.2	Wheat	cytosol	44.11	41.71
TraesCS3D01G294900.3	Wheat	cytosol	44.38	41.54
KRH49951	Soybean	nucleus	39.18	37.93
HORVU3Hr1G072950.3	Barley	cytosol	44.66	37.64
TraesCS3A01G306900.1	Wheat	cytosol	40.55	36.72
KRH19024	Soybean	nucleus	20.0	30.29
Zm00001d012707_P003	Maize	cytosol	16.99	28.84
KRH41925	Soybean	cytosol	12.88	24.35

Protein Annotations

KEGG:00740+2.7.1.26	Gene3D:1.10.150.240	EntrezGene:100801888	Gene3D:3.40.50.1000	MapMan:35.1	EMBL:ACUP02007762
EnsemblPlantsGene:GLYMA_12G210300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008531
GO:GO:0009058	GO:GO:0009231	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016787	InterPro:HAD-SF_hydro_IA	InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1LUM2	InterPro:IPR023198
InterPro:IPR023214	ProteinID:KRH27039.1	EnsemblPlants:KRH27040	ProteinID:KRH27040	ProteinID:KRH27040.1	PFAM:PF13419
InterPro:PGP-like_dom2	PRINTS:PR00413	PANTHER:PTHR22749	PANTHER:PTHR22749:SF4	MetaCyc:PWY-5523	MetaCyc:PWY-6168
MetaCyc:PWY-7863	InterPro:Riboflavin_kinase	SUPFAM:SSF56784	TIGRFAMs:TIGR01509	UniParc:UPI000233C743	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:36935825..36941031

Molecular Weight (calculated)

40752.1 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.186

Length

365 amino acids

Sequence
(BLAST)

001: MSCCCEFNGC NQGAKVLAVI FDLDGTLLDT ERATRGVLNE FLARYGKELD REKEEKKRLG MTQKDSAAII VKDYELPLTP DQFIKEITPL YRERWAKAKA
101: LPGANRLIKH LQKNGVPMAL ASNSLQENIE AKIYHHKGWK ESFSVILGSD QVKSGKPSPY LFEEAAKKMG VDAVNCLVIE DSLVGVKAAN AAKMKVVAVP
201: SRREADCNGL ANAVLHSLLE FQPELWGLPP FDDWIDDTLP IDPLHLSGLY VTGCLQEATE NATLALPDQA VGLYFGWTKV DTDENLKILV SINIDFSCVG
301: YKKIHVYLID ANSELKHKQM MQIHLVGYIR AWDNKELTST ELEKLDEYKS IARASLDLPS FTCCL

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.