Factsheet for Os10t0209300-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0743500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G21470.1	Os03t0743500-02	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0464400-01	Rice	cytosol	90.7	19.65
TraesCS1B01G164900.1	Wheat	cytosol	87.21	18.89
TraesCS1A01G146600.1	Wheat	cytosol	87.21	18.89
TraesCS1D01G144800.1	Wheat	cytosol	86.05	18.64
OQU91676	Sorghum	cytosol, nucleus, plastid	75.58	16.54
EER92955	Sorghum	plastid	75.58	16.41
Os01t0757900-01	Rice	cytosol	34.88	15.31
HORVU1Hr1G038850.2	Barley	plastid	84.88	14.96
VIT_00s0181g00130.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	60.47	13.4
Solyc02g079100.2.1	Tomato	extracellular	58.14	12.99
GSMUA_Achr1P03460_001	Banana	cytosol, nucleus, plasma membrane	56.98	12.83
VIT_00s0181g00140.t01	Wine grape	mitochondrion, plastid	59.3	12.69
KRH49951	Soybean	nucleus	51.16	11.67
Os08t0243600-01	Rice	cytosol, nucleus	31.4	11.25
GSMUA_Achr5P20490_001	Banana	cytosol	50.0	11.08
CDX79065	Canola	cytosol	48.84	11.08
CDX82826	Canola	cytosol	48.84	11.08
Zm00001d037045_P004	Maize	cytosol	81.4	10.54
AT4G21470.1	Thale cress	cytosol	45.35	10.29
KRH41925	Soybean	cytosol	1.16	0.52
PGSC0003DMT400057721	Potato	cytosol	1.16	0.36

Protein Annotations

EnsemblPlants:Os10t0209300-00	EnsemblPlantsGene:Os10g0209300	Gene3D:1.10.150.240	Gene3D:3.40.50.1000	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023198	InterPro:IPR023214	InterPro:PGP-like_dom2	InterPro:Riboflavin_kinase	KEGG:00740+2.7.1.26	PANTHER:PTHR22749
PANTHER:PTHR22749:SF1	ProteinID:BAT10275.1	SUPFAM:SSF56784	UniParc:UPI00005E1C98	UniProt:A0A0P0XT88	MapMan:35.1

Description

Similar to HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed. (Os10t0209300-00)

Coordinates

chr10:-:7761015..7765411

Molecular Weight (calculated)

9498.6 Da

IEP (calculated)

6.512

GRAVY (calculated)

0.009

Length

86 amino acids

Sequence
(BLAST)

1: MATPEPIARL ISHVILDLDG TLLNTDCVVS QVLKPFLVKN GKKWDSKKAH KLVGKTPYEA AAVVLEDYGL PYSTEEFLSM LTPNVQ

Best Arabidopsis Sequence Match ( AT4G21470.1 )
(BLAST)

001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK

Arabidopsis Description

FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.