Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79065 | Canola | cytosol | 92.35 | 92.35 |
| CDX82826 | Canola | cytosol | 91.03 | 91.03 |
| KRH41925 | Soybean | cytosol | 41.42 | 81.35 |
| PGSC0003DMT400057721 | Potato | cytosol | 54.62 | 75.55 |
| KRH49951 | Soybean | nucleus | 72.82 | 73.21 |
| Solyc02g079100.2.1 | Tomato | extracellular | 72.82 | 71.69 |
| VIT_00s0181g00130.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 71.24 | 69.59 |
| VIT_00s0181g00140.t01 | Wine grape | mitochondrion, plastid | 70.98 | 66.92 |
| TraesCS1A01G146600.1 | Wheat | cytosol | 69.66 | 66.5 |
| TraesCS1B01G164900.1 | Wheat | cytosol | 69.39 | 66.25 |
| TraesCS1D01G144800.1 | Wheat | cytosol | 69.13 | 66.0 |
| GSMUA_Achr5P20490_001 | Banana | cytosol | 67.28 | 65.72 |
| Os10t0464400-01 | Rice | cytosol | 68.34 | 65.24 |
| EER92955 | Sorghum | plastid | 67.02 | 64.14 |
| OQU91676 | Sorghum | cytosol, nucleus, plastid | 66.23 | 63.87 |
| GSMUA_Achr1P03460_001 | Banana | cytosol, nucleus, plasma membrane | 63.85 | 63.35 |
| HORVU1Hr1G038850.2 | Barley | plastid | 68.6 | 53.28 |
| Os10t0209300-00 | Rice | cytosol | 10.29 | 45.35 |
| Zm00001d037045_P004 | Maize | cytosol | 67.02 | 38.25 |
| AT5G57440.1 | Thale cress | cytosol | 16.89 | 26.67 |
| AT4G25840.1 | Thale cress | mitochondrion | 16.62 | 21.14 |
Protein Annotations
| KEGG:00740+2.7.1.26 | Gene3D:1.10.150.240 | Gene3D:2.40.30.30 | Gene3D:3.40.50.1000 | MapMan:7.10.8 | EntrezGene:828232 |
| UniProt:A0A178V341 | ProteinID:AEE84457.1 | EMBL:AK227237 | ArrayExpress:AT4G21470 | EnsemblPlantsGene:AT4G21470 | RefSeq:AT4G21470 |
| TAIR:AT4G21470 | RefSeq:AT4G21470-TAIR-G | EnsemblPlants:AT4G21470.1 | TAIR:AT4G21470.1 | Symbol:ATFMN/FHY | EMBL:AY878327 |
| Unigene:At.2263 | EMBL:BT006373 | ProteinID:CAA18711.1 | ProteinID:CAB81254.1 | GO:GO:0000166 | GO:GO:0000287 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003919 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008531 | GO:GO:0009058 | GO:GO:0009231 | GO:GO:0009398 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0046872 |
| InterPro:HAD-SF_hydro_IA | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023198 | InterPro:IPR023214 | InterPro:IPR023465 |
| RefSeq:NP_193878.2 | ProteinID:OAP00750.1 | PFAM:PF01687 | PFAM:PF13419 | InterPro:PGP-like_dom2 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00413 |
| PANTHER:PTHR22749 | PANTHER:PTHR22749:SF1 | UniProt:Q84MD8 | InterPro:Riboflavin_kinase | InterPro:Riboflavin_kinase_bac/euk | InterPro:Riboflavin_kinase_dom_sf |
| SMART:SM00904 | SUPFAM:SSF56784 | SUPFAM:SSF82114 | TIGRFAMs:TIGR01509 | TIGRFAMs:TIGR01549 | UniParc:UPI0000190A27 |
| SEG:seg | : | : | : | : | : |
Description
FHYFMN/FHY [Source:UniProtKB/TrEMBL;Acc:A0A178V341]
Coordinates
chr4:+:11431104..11433322
Molecular Weight (calculated)
42112.6 Da
IEP (calculated)
6.325
GRAVY (calculated)
-0.202
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSNSLKKL SSCVLIDLDG TLINTDGVVG DILRKYLCKY GKQWDGRESL KIVGKTPVEA ATTIVEDYEL PCKVDEFNSE FYPLFSAQMD KIKSLPGANR
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK
101: LIRHLKCHGV PVALASNSSR ANIESKISYH EGWKECFSVI VGSDEVSKGK PSPDIFLEAA KRLKKDPADC LVIEDSVPGV MAGKAAGTKV IAVPSLPKQT
201: HLYTSADEVI NSLLDIRLEK WGLPPFQDWI ENTLPIDPWH IGGPVIKGFG RGSKVLGIPT ANLSTKDYAD ELVEHPSGVY FGWAGLAKRG VFKMVMSIGW
301: NPYFNNKEKT IEPWLLHDFT EDFYGEELRL IIVGYIRPEA NFSSLESLIA KIHEDREVAE KALDLPSYAK FKGDPYLTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.