Factsheet for Zm00001d029059_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d006025_P001
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d020937_P001
Zm00001d028948_P001
Zm00001d031444_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001
Zm00001d052889_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	Zm00001d006025_P001	AT5G12900.1	15618632
AT3G56370.1	Zm00001d020937_P001	AT5G12900.1	15618632
AT3G56370.1	Zm00001d031444_P001	AT5G12900.1	15618632
AT3G56370.1	Zm00001d052889_P001	AT5G12900.1	15618632
AT5G01890.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT5G01890.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT5G01890.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT5G01890.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT5G01890.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT5G01890.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT5G01890.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT5G01890.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94903	Sorghum	plasma membrane	95.99	95.99
Os03t0335500-01	Rice	plasma membrane	86.52	86.61
TraesCS4A01G135200.1	Wheat	plasma membrane	84.05	83.97
HORVU4Hr1G050250.1	Barley	plasma membrane	83.64	83.56
TraesCS4D01G172000.1	Wheat	plasma membrane	83.54	83.45
TraesCS4B01G169900.1	Wheat	plasma membrane	83.23	82.89
GSMUA_Achr9P04820_001	Banana	plasma membrane	54.01	67.14
GSMUA_Achr6P32490_001	Banana	plasma membrane	51.75	65.67
PGSC0003DMT400042952	Potato	plasma membrane	56.89	61.86
Solyc06g048950.2.1	Tomato	plasma membrane	56.07	60.96
Zm00001d043058_P001	Maize	plasma membrane	59.36	60.8
KRH53723	Soybean	plasma membrane	60.29	59.92
KRH64211	Soybean	plasma membrane	60.29	59.92
PGSC0003DMT400070944	Potato	plasma membrane	59.57	59.75
Solyc06g048620.2.1	Tomato	plasma membrane	59.67	59.73
CDY27220	Canola	plasma membrane	57.41	59.62
VIT_08s0058g01340.t01	Wine grape	plasma membrane	57.2	59.47
CDX72142	Canola	plasma membrane	57.2	59.4
Bra007241.1-P	Field mustard	plasma membrane	58.54	59.33
AT3G56370.1	Thale cress	plasma membrane	57.92	58.4
KRH00443	Soybean	cytosol, nucleus	55.35	57.85
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	41.05	57.83
VIT_13s0067g03050.t01	Wine grape	plasma membrane	61.83	57.79
KRH40729	Soybean	plasma membrane	56.48	56.77
KRH76129	Soybean	plasma membrane	55.97	56.14
PGSC0003DMT400068892	Potato	plasma membrane	52.98	54.9
KRH65414	Soybean	plasma membrane	54.73	54.85
CDY04822	Canola	plasma membrane	52.26	54.74
Zm00001d038481_P001	Maize	plasma membrane, plastid	54.73	54.56
Solyc09g015520.2.1	Tomato	plasma membrane	53.19	53.58
AT5G01890.1	Thale cress	plasma membrane	52.37	52.64
Zm00001d042051_P001	Maize	mitochondrion	43.83	40.84
Zm00001d011834_P001	Maize	plasma membrane	43.52	40.17
Zm00001d027463_P001	Maize	plasma membrane	35.6	38.36
Zm00001d048453_P001	Maize	plastid	35.6	38.23
Zm00001d037114_P002	Maize	plasma membrane	31.38	30.68
Zm00001d018261_P002	Maize	plasma membrane	30.97	30.01
Zm00001d045481_P004	Maize	plasma membrane	30.25	29.85

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100304322	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6K256
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	ProteinID:ONL97775.1	PFAM:PF00560	PFAM:PF07714
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000220C00D	EnsemblPlantsGene:Zm00001d029059	EnsemblPlants:Zm00001d029059_P001	EnsemblPlants:Zm00001d029059_T001	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase IRK

Coordinates

chr1:+:56743156..56747187

Molecular Weight (calculated)

103285.0 Da

IEP (calculated)

5.462

GRAVY (calculated)

0.080

Length

972 amino acids

Sequence
(BLAST)

001: MRPLALLVLA HLAALAAAAE AKGGVAGAGL GDDVLGLIVF KADVSDPDGR LATWSEDDER PCAWDGVTCD ARTGRVSALS LAGFGLSGKL GRGLLRLEAL
101: QSLSLARNNL SGDVPADLAR LPALQTLDLS ANAFAGAVPE GLFGRCRSLR DVSLANNAFS GGIPRDVAAC ATLASLNLSS NRLDGALPSD IWSLNALRTL
201: DISGNAVTGD LPIGVSRMFN LRELNLRGNR LTGSLPDDIG DCPLLRSVDL GSNSLSGNLP ESLRRLSTCT YLDLSSNEFT GSVPTWFGEM TSLEMLDLSG
301: NRLSGEIPGS IGELMSLREL RLSGNGFTGA LPESIGGCKS LMHVDVSWNS LTGALPTWVL SSSVQWVSVS QNTLSGDLKV PANASSVLQG VDLSNNAFSG
401: VIPSEISKLQ NLQSLNMSWN SMYGSIPASI LEMKSLEVLD FTANRLNGCI PASKGGESLK ELRLGKNFLT GNIPAQIGNC SALASLDLSH NSLTGVIPEA
501: LSNLTNLEIV DLSQNKLTGV LPKQLSNLPH LLQFNVSHNQ LSGDLPPGSF FDTIPLSCVS DNPGLCGAKL NSSCPGVLPK PIVLNPNTSS DPISPTELVP
601: DGGRHHKKTI LSISALVAIG AAVLIAVGVI TITVLNLRVR APGSHSGAVL ELSDGYLSQS PTTDMNAGKL VMFGGGNPEF SASTHALLNK DCELGRGGFG
701: TVYKTTLRDG QPVAIKKLTV SSLVKSQVEF EREVKMLGKL RHRNLVALKG YYWTPSLQLL IYEFVSGGNL HKQLHESSTT NCLPWKERFD IVLGIARSLA
801: HLHRHDIIHY NLKSSNILLD GSGEAKVGDY GLAKLLPMLD RYVLSSKVQS ALGYMAPEFA CRTVKITEKC DVYGFGVLIL EILTGRTPVE YMEDDVVVLC
901: DVVRAALDEG KVEECVDERL CGKFPLEEAV PIMKLGLVCT SQVPSNRPDM GEVVNILELI RCPQDSPETE LG

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.