CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01890.1	KRG89812	AT2G41090.1	17360592
AT5G01890.1	KRG94975	AT2G41090.1	17360592
AT5G01890.1	KRH18664	AT2G41090.1	17360592
AT5G01890.1	KRH31638	AT4G14640.1	17360592
AT5G01890.1	KRH69070	AT4G14640.1	17360592
AT5G01890.1	KRG89812	AT5G21274.1	17360592
AT5G01890.1	KRG94975	AT5G21274.1	17360592
AT5G01890.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65414	Soybean	plasma membrane	95.25	95.15
KRH00443	Soybean	cytosol, nucleus	77.71	80.97
KRH40729	Soybean	plasma membrane	79.67	79.83
VIT_08s0058g01340.t01	Wine grape	plasma membrane	65.84	68.24
PGSC0003DMT400068892	Potato	plasma membrane	62.33	64.39
Solyc09g015520.2.1	Tomato	plasma membrane	63.47	63.73
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	43.55	61.16
KRH64211	Soybean	plasma membrane	61.09	60.53
KRH53723	Soybean	plasma membrane	60.89	60.33
CDY04822	Canola	plasma membrane	56.76	59.27
GSMUA_Achr9P04820_001	Banana	plasma membrane	47.57	58.95
AT5G01890.1	Thale cress	plasma membrane	58.51	58.63
GSMUA_Achr6P32490_001	Banana	plasma membrane	45.61	57.7
TraesCS4D01G172000.1	Wheat	plasma membrane	57.07	56.83
TraesCS4A01G135200.1	Wheat	plasma membrane	57.07	56.83
HORVU4Hr1G050250.1	Barley	plasma membrane	57.07	56.83
TraesCS4B01G169900.1	Wheat	plasma membrane	56.86	56.45
EER94903	Sorghum	plasma membrane	56.24	56.07
Zm00001d029059_P001	Maize	plasma membrane	56.14	55.97
Os03t0335500-01	Rice	plasma membrane	55.93	55.82
GSMUA_Achr5P29680_001	Banana	plasma membrane	43.14	55.81
Os01t0821900-01	Rice	peroxisome, plasma membrane	42.62	53.29
TraesCS3D01G337800.1	Wheat	plasma membrane	50.77	51.9
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	42.11	51.84
TraesCS3B01G376200.1	Wheat	plasma membrane	50.57	51.8
EES03806	Sorghum	plasma membrane	50.67	51.79
TraesCS3A01G344300.1	Wheat	plasma membrane	46.44	51.61
HORVU3Hr1G081050.3	Barley	plastid	44.58	51.49
Zm00001d043058_P001	Maize	plasma membrane	49.74	50.79
EES18394	Sorghum	plasma membrane, plastid	46.34	47.56
Zm00001d038481_P001	Maize	plasma membrane, plastid	47.16	46.87
KRH70560	Soybean	plasma membrane	43.55	41.91
KRH01549	Soybean	nucleus, plasma membrane	43.55	41.91
KRH27994	Soybean	plasma membrane	32.71	35.86
KRH77441	Soybean	plasma membrane	32.09	35.1
KRH61582	Soybean	plasma membrane	31.89	31.37
KRH15603	Soybean	plasma membrane	31.58	31.22
KRH52253	Soybean	plasma membrane	31.58	31.1
KRH05414	Soybean	plasma membrane	31.37	31.02
KRH35424	Soybean	plasma membrane	31.37	30.74
KRG91394	Soybean	plasma membrane	31.48	30.71
KRH38704	Soybean	plasma membrane	30.55	30.08
KRH09211	Soybean	plasma membrane	30.86	29.63

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100791204	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02000569
ncoils:Coil	EnsemblPlantsGene:GLYMA_01G133300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7K3M5
EnsemblPlants:KRH76129	ProteinID:KRH76129	ProteinID:KRH76129.1	ProteinID:KRH76130.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF324	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix
UniParc:UPI0002336FA7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:45351801..45356207

Molecular Weight (calculated)

105993.0 Da

IEP (calculated)

5.588

GRAVY (calculated)

0.113

Length

969 amino acids

Sequence
(BLAST)

001: MKQVQLILLL SVSLVLLGPI LVISIDLSSF NDDVLGLIVF KAGLEDPKGK LSTWNEDDYS PCNWVGVKCD LANNRVSSLV LDGFSLSGHI DRGLLRLQFL
101: QILSLSRNNF TGTIAPDLLS IGDLQVVDLS ENNLYGPIPD GIFQQCWSLR VVSFANNNLT GKIPDSLSSC YSLAVVNFSS NQLHGELPSG MWFLRGLQSI
201: DLSNNFLEGE IPEGIQNLID LRELRLGSNH FTGRVPEHIG DCLLLKLVDF SDNSISGRLP ESMQKLTSCT FLSLQGNSFT GGIPHWIGEM KSLEVLDLSA
301: NRFSGWIPKS IGNLDLLSRL NLSRNQITGN LPELMVNCIK LLTLDISHNH LAGHLPSWIF RMGLQSVSLS GNRFSESNYP SLTSIPVSFH GLQVLDLSSN
401: AFFGQLPSGI GGLSSLQVLN LSTNNISGSI PMSIGELKSL YILDLSDNKL NGSIPSEVEG AISLSEMRLQ KNFLGGRIPA QIEKCSELTF LNLSHNKLIG
501: SIPSAIANLT NLQYADFSWN ELSGSLPKEL TNLSNLFSFN VSYNRLQGEL PVGGFFNTIS PLSVSGNPLL CGSVVNHSCP SVHPKPIVLN PNSSYSNSGS
601: SLQNNHHKMM LSISVIIAIG AAIFIVIGVV VVTVLNIHAR SSMLSSAAPF VFSGGEDYSG SPANDPNYGK LVMFSGDAEF VDGAHNILNK DSEIGRGGFG
701: VVYCTVLRDG HCVAIKKLTV STLTKSQEDF EREVKMLGKI KHQNLVALEG YYWTPSLQLL IYEYLARGSL QKLLHDDDSS KNLLSWRQRF KIILGMAKGL
801: AYLHQMELIH YNLKSTNVFI DCSDEPKIGD FGLVRLLPML DHCVLSSKIQ SALGYMAPEF ACRTVKITEK CDIYSFGILI LEVVTGKRPV EYMEDDVVVL
901: CDKVRSALDD GKVEQCVDEK LKGNFAAEEA IPVIKLGLVC ASQVPSNRPD MAEVINILEL IQCPSEELQ

Best Arabidopsis Sequence Match ( AT5G01890.1 )
(BLAST)

001: MFNGAVSLLF LFLAVVSARA DPTFNDDVLG LIVFKAGLDD PLSKLSSWNS EDYDPCNWVG CTCDPATNRV SELRLDAFSL SGHIGRGLLR LQFLHTLVLS
101: NNNLTGTLNP EFPHLGSLQV VDFSGNNLSG RIPDGFFEQC GSLRSVSLAN NKLTGSIPVS LSYCSTLTHL NLSSNQLSGR LPRDIWFLKS LKSLDFSHNF
201: LQGDIPDGLG GLYDLRHINL SRNWFSGDVP SDIGRCSSLK SLDLSENYFS GNLPDSMKSL GSCSSIRLRG NSLIGEIPDW IGDIATLEIL DLSANNFTGT
301: VPFSLGNLEF LKDLNLSANM LAGELPQTLS NCSNLISIDV SKNSFTGDVL KWMFTGNSES SSLSRFSLHK RSGNDTIMPI VGFLQGLRVL DLSSNGFTGE
401: LPSNIWILTS LLQLNMSTNS LFGSIPTGIG GLKVAEILDL SSNLLNGTLP SEIGGAVSLK QLHLHRNRLS GQIPAKISNC SALNTINLSE NELSGAIPGS
501: IGSLSNLEYI DLSRNNLSGS LPKEIEKLSH LLTFNISHNN ITGELPAGGF FNTIPLSAVT GNPSLCGSVV NRSCLSVHPK PIVLNPNSSN PTNGPALTGQ
601: IRKSVLSISA LIAIGAAAVI AIGVVAVTLL NVHARSSVSR HDAAAALALS VGETFSCSPS KDQEFGKLVM FSGEVDVFDT TGADALLNKD SELGRGGFGV
701: VYKTSLQDGR PVAVKKLTVS GLIKSQEEFE REMRKLGKLR HKNVVEIKGY YWTQSLQLLI HEFVSGGSLY RHLHGDESVC LTWRQRFSII LGIARGLAFL
801: HSSNITHYNM KATNVLIDAA GEAKVSDFGL ARLLASALDR CVLSGKVQSA LGYTAPEFAC RTVKITDRCD VYGFGILVLE VVTGKRPVEY AEDDVVVLCE
901: TVREGLEEGR VEECVDPRLR GNFPAEEAIP VIKLGLVCGS QVPSNRPEME EVVKILELIQ CPSHDLE

Arabidopsis Description

PXC2Leucine-rich repeat receptor-like protein kinase PXC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.