CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70560	Soybean	plasma membrane	96.92	96.92
VIT_05s0062g01070.t01	Wine grape	nucleus	70.9	72.41
PGSC0003DMT400055650	Potato	plasma membrane	68.52	70.12
Solyc09g098290.2.1	Tomato	plasma membrane	69.22	68.87
CDX85183	Canola	cytosol, plasma membrane	59.19	63.88
Bra025319.1-P	Field mustard	plasma membrane	63.65	63.4
CDX86452	Canola	plasma membrane	63.65	63.4
CDY68115	Canola	cytosol	8.54	62.77
Bra039063.1-P	Field mustard	plasma membrane	62.86	62.43
AT3G28040.1	Thale cress	plasma membrane	62.96	62.4
CDY20032	Canola	plasma membrane	62.76	62.33
CDY00141	Canola	plasma membrane	62.07	61.7
GSMUA_Achr6P27930_001	Banana	plasma membrane	43.2	59.83
GSMUA_Achr9P01740_001	Banana	plasma membrane	44.79	58.57
Os01t0957100-01	Rice	plasma membrane	52.53	57.31
GSMUA_Achr6P06620_001	Banana	plasma membrane	44.79	56.94
Zm00001d042051_P001	Maize	mitochondrion	54.82	52.92
HORVU3Hr1G109760.1	Barley	plasma membrane	54.42	52.09
TraesCS3A01G495400.1	Wheat	plasma membrane	54.22	51.66
Zm00001d011834_P001	Maize	plasma membrane	53.43	51.09
Bra029522.1-P	Field mustard	cytosol	10.43	50.0
CDY42780	Canola	cytosol	10.33	50.0
CDY70210	Canola	cytosol	10.43	50.0
KXG34152	Sorghum	plasma membrane	55.11	49.6
CDX96323	Canola	cytosol	10.33	49.52
TraesCS3D01G502600.1	Wheat	plasma membrane	53.82	47.5
KRH64211	Soybean	plasma membrane	44.39	45.71
KRH53723	Soybean	plasma membrane	44.29	45.6
KRH00443	Soybean	cytosol, nucleus	41.51	44.95
KRH40729	Soybean	plasma membrane	42.4	44.16
KRH65414	Soybean	plasma membrane	42.3	43.92
KRH76129	Soybean	plasma membrane	41.91	43.55
KRH77441	Soybean	plasma membrane	32.67	37.13
KRH27994	Soybean	plasma membrane	32.57	37.1
KRH38704	Soybean	plasma membrane	30.59	31.3
KRG91394	Soybean	plasma membrane	30.78	31.22
KRH35424	Soybean	plasma membrane	30.59	31.14
KRH05414	Soybean	plasma membrane	30.09	30.92
KRH52253	Soybean	plasma membrane	30.19	30.89
KRH15603	Soybean	plasma membrane	29.99	30.82
KRH61582	Soybean	plasma membrane	30.09	30.76
KRH09211	Soybean	plasma membrane	30.59	30.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100813764	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02011521
EnsemblPlantsGene:GLYMA_18G284100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7MV97	EnsemblPlants:KRH01549
ProteinID:KRH01549	ProteinID:KRH01549.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF221
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233EFC0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:56477698..56481601

Molecular Weight (calculated)

110212.0 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.034

Length

1007 amino acids

Sequence
(BLAST)

0001: MTSFQFHLRV LSLLISVSYL LTCLGNNGIP VQLNDDVLGL IVFKSDLNDP SSYLASWNED DANPCSWQFV QCNPESGRVS EVSLDGLGLS GKIGRGLEKL
0101: QHLTVLSLSH NNLSGSISPS LTLSNSLERL NLSHNVLSGS IPTSFVNMNS IKFLDLSENS FSGPMPESFF ESCSSLHHIS LARNMFDGPV PGSLSRCSSL
0201: NSINLSNNHF SGNVDFSGIW SLNRLRTLDL SNNALSGSLP NGISSVHNFK EILLQGNQFS GPLSTDIGFC LHLNRLDFSD NQFSGELPES LGMLSSLSYF
0301: KASNNHFNSE FPQWIGNMTS LEYLELSNNQ FTGSIPQSIG ELRSLTHLSI SNNMLVGTIP SSLSFCTKLS VVQLRGNGFN GTIPEGLFGL GLEEIDLSHN
0401: ELSGSIPPGS SRLLETLTHL DLSDNHLQGN IPAETGLLSK LTHLNLSWND LHSQMPPEFG LLQNLAVLDL RNSALHGSIP ADICDSGNLA VLQLDGNSFE
0501: GNIPSEIGNC SSLYLLSLSH NNLTGSIPKS MSKLNKLKIL KLEFNELSGE IPMELGMLQS LLAVNISYNR LTGRLPTSSI FQNLDKSSLE GNLGLCSPLL
0601: KGPCKMNVPK PLVLDPNAYN NQISPQRQTN ESSESGPVHR HRFLSVSAIV AISASFVIVL GVIAVSLLNV SVRRRLTFLD NALESMCSSS SRSGSPATGK
0701: LILFDSQSSP DWISNPESLL NKASEIGEGV FGTLYKVPLG SQGRMVAIKK LISTNIIQYP EDFDREVRIL GKARHPNLIA LKGYYWTPQL QLLVTEFAPN
0801: GSLQAKLHER LPSSPPLSWA IRFKILLGTA KGLAHLHHSF RPPIIHYNIK PSNILLDENY NAKISDFGLA RLLTKLDRHV MSNRFQSALG YVAPELACQS
0901: LRVNEKCDVY GFGVMILELV TGRRPVEYGE DNVLILNDHV RVLLEQGNVL ECVDQSMSEY PEDEVLPVLK LAMVCTSQIP SSRPTMAEVV QILQVIKTPV
1001: PQRMEVF

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.