CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42780	Canola	cytosol	88.32	58.17
CDX96323	Canola	cytosol	82.48	53.81
CDY70210	Canola	cytosol	81.75	53.33
CDY45475	Canola	cytosol	26.28	17.65
CDX85183	Canola	cytosol, plasma membrane	76.64	11.25
CDX86452	Canola	plasma membrane	76.64	10.39
GSMUA_Achr6P27930_001	Banana	plasma membrane	54.74	10.32
CDY20032	Canola	plasma membrane	74.45	10.06
CDY00141	Canola	plasma membrane	73.72	9.97
GSMUA_Achr6P06620_001	Banana	plasma membrane	54.01	9.34
GSMUA_Achr9P01740_001	Banana	plasma membrane	49.63	8.83
VIT_05s0062g01070.t01	Wine grape	nucleus	62.77	8.72
KRH01549	Soybean	nucleus, plasma membrane	62.77	8.54
KRH70560	Soybean	plasma membrane	62.04	8.44
Os01t0957100-01	Rice	plasma membrane	56.2	8.34
PGSC0003DMT400055650	Potato	plasma membrane	59.85	8.33
Solyc09g098290.2.1	Tomato	plasma membrane	59.85	8.1
Zm00001d042051_P001	Maize	mitochondrion	56.2	7.38
Zm00001d011834_P001	Maize	plasma membrane	54.01	7.03
KXG34152	Sorghum	plasma membrane	56.2	6.88
HORVU3Hr1G109760.1	Barley	plasma membrane	51.09	6.65
TraesCS3A01G495400.1	Wheat	plasma membrane	51.09	6.62
CDY30082	Canola	cytosol	34.31	6.14
TraesCS3D01G502600.1	Wheat	plasma membrane	51.09	6.13
CDX72142	Canola	plasma membrane	40.15	5.88
CDY04822	Canola	plasma membrane	39.42	5.82
CDY27220	Canola	plasma membrane	39.42	5.77
CDX98061	Canola	plasma membrane	35.04	5.58
CDX99001	Canola	plasma membrane	30.66	4.36
CDY00268	Canola	plasma membrane	29.93	4.24
CDX86913	Canola	plasma membrane	29.93	4.23
CDX76712	Canola	plasma membrane	29.93	4.15
CDY11488	Canola	plasma membrane	29.93	4.15
CDX70013	Canola	plasma membrane	29.2	4.15
CDX76716	Canola	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY68115	EnsemblPlantsGene:GSBRNA2T00069279001	Gene3D:1.10.510.10	InterPro:Kinase-like_dom_sf	PANTHER:PTHR27000	PANTHER:PTHR27000:SF221
ProteinID:CDY68115	ProteinID:CDY68115.1	SUPFAM:SSF56112	UniParc:UPI0004EB4D3B	UniProt:A0A078JNR2	MapMan:35.1

Description

BnaC01g42200DBnaC01g42200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNR2]

Coordinates

chrLK036872:+:6247..6908

Molecular Weight (calculated)

15583.9 Da

IEP (calculated)

4.225

GRAVY (calculated)

0.185

Length

137 amino acids

Sequence
(BLAST)

001: MVPVTSSLNQ FELRSSRTDG NMWVNEKYDV YGFGVLILEL LIGRRLVEYS EDIFVILRDH VRVLLEQGNV LECIDPTIEE EYSEDEVLPF LKLALVCTSQ
101: IPSNLPTMAE IVQILQAISS PVPHRMLDSF SKNSVLI

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.