CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98061	Canola	plasma membrane	92.17	82.09
AT1G12460.1	Thale cress	plasma membrane	86.16	74.83
CDY45475	Canola	cytosol	17.62	66.18
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	40.08	63.56
KRH77441	Soybean	plasma membrane	65.14	56.32
KRH27994	Soybean	plasma membrane	64.49	55.88
PGSC0003DMT400010074	Potato	plasma membrane	64.1	55.67
Solyc08g079740.2.1	Tomato	plasma membrane	63.71	55.33
GSMUA_Achr1P03780_001	Banana	plasma membrane	47.65	52.82
GSMUA_Achr5P10330_001	Banana	plasma membrane	50.91	52.49
Os10t0531700-00	Rice	plasma membrane	52.09	49.75
Os03t0127700-02	Rice	plasma membrane	56.14	48.26
TraesCS4D01G317100.1	Wheat	plasma membrane	54.83	47.14
TraesCS5A01G491400.1	Wheat	plasma membrane	54.7	47.03
EER95591	Sorghum	plasma membrane	54.83	46.98
TraesCS4B01G320600.1	Wheat	plasma membrane	54.31	46.74
Zm00001d048453_P001	Maize	plastid	54.83	46.41
Zm00001d027463_P001	Maize	plasma membrane	53.92	45.79
HORVU4Hr1G083020.3	Barley	plasma membrane	53.0	45.06
HORVU4Hr1G003680.1	Barley	plasma membrane	33.42	38.55
CDY68115	Canola	cytosol	6.14	34.31
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	29.24	33.43
CDX72142	Canola	plasma membrane	37.47	30.66
CDY27220	Canola	plasma membrane	37.34	30.56
CDY04822	Canola	plasma membrane	36.68	30.28
CDX85183	Canola	cytosol, plasma membrane	34.6	28.4
CDY42780	Canola	cytosol	7.57	27.88
CDX86452	Canola	plasma membrane	36.42	27.6
CDY70210	Canola	cytosol	7.44	27.14
CDY20032	Canola	plasma membrane	35.77	27.02
CDY00141	Canola	plasma membrane	35.38	26.75
CDX96323	Canola	cytosol	7.31	26.67
CDX76716	Canola	plasma membrane	5.74	25.73
CDX99001	Canola	plasma membrane	30.68	24.38
CDY00268	Canola	plasma membrane	30.29	23.99
CDX70013	Canola	plasma membrane	30.16	23.99
CDX86913	Canola	plasma membrane	30.29	23.92
CDY11488	Canola	plasma membrane	30.42	23.61
CDX76712	Canola	plasma membrane	30.29	23.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078GY01	UniProt:A0A078GY01
EnsemblPlants:CDY30082	ProteinID:CDY30082	ProteinID:CDY30082.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00044637001	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR45268	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0004EE41F3	SEG:seg	:

Description

BnaC05g09380DBnaC05g09380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY01]

Coordinates

chrLK032248:+:461778..464758

Molecular Weight (calculated)

83303.5 Da

IEP (calculated)

5.900

GRAVY (calculated)

-0.047

Length

766 amino acids

Sequence
(BLAST)

001: MKRVYLFLER DILLQFKDSI TDDPYNSLAS WTLDGDICNS FNGVACNPEG FVDKIVLWNT SLAGSLTPSL SGLKSIRVLT LFGNRFTGNL PLDYSKLQTL
101: WTINVSSNAL SGPTPEFIGG LTSLRFLDLS RNGFSGEIPT SLFRYCDKTK FVSLSRNNLS GPIPDTVANC NNLVGFDFSY NSLNGVLPPG VCDIPVLEYI
201: SVRNNLLSGD VSEEVVKCKR LSHVDLGSNM FQGSGPFEVL GFVNITYVNV SWNRFGGEIG EVVGCGQRLE FLDASSNELT GGISSGVTGC KSLKLLDLES
301: NKLSGSIPGG IGKMEKLSFL DLSQNSLSGS IPSSLGSLNR LTHFNVSHNN LSGVIPPAPA LQAFGASAFE NNPLLCGDPL VTTPCNSRGA ATGKSRNSEA
401: LSVSVIIVIV AAAVILFGVC VVLGLNLRAR KRRKDEEEEV VTLETTPLAS SIDSSGGGVI IGKLVLFSKN LPSKYEDWEA GTKALLDKDN IIGMGSIGSV
501: YRASFEGGVS IAVKKLETLG RIRNQEEFEQ ELGRLGGLQH QNLSSYQGYY FSSTMQLILS DFVPNGSLYD NLHSRIYPGA STSHGNTDLN WHRRFGIALG
601: TAKALSFLHD DCKPAVLHLN VKSTNILLDE RYEAKLSDYG LEKFLPKFHN AVGYIAPELA QQSLKASEKC DVYSYGVVLL ELVTGRKPVE SPSRNQVLIL
701: RDYVRDMLET GSASDCFDRR LREFEENELI QVMKLGLLCT SENPLKRPSM AEVVQVLESI RNGFGS

Best Arabidopsis Sequence Match ( AT1G12460.2 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGSNLFH GLAPFAVLTF KNITYFNVSW NRFGGEIGEI VDCSESLEFL DASSNELTGR IPTGVMGCKS LKLLDLESNK LNGSIPGSIG KMESLSVIRL
201: GNNSIDGVIP RDIGSLEFLQ VLNLHNLNLI GEVPEDISNC RVLLELDVSG NDLEGKISKK LLNLTNIKIL DLHRNRLNGS IPPELGNLSK VQFLDLSQNS
301: LSGPIPSSLG SLNTLTHFNV SYNNLSGVIP PVPMIQAFGS SAFSNNPFLC GDPLVTPCNS RGAAAKSRNS DALSISVIIV IIAAAVILFG VCIVLALNLR
401: ARKRRKDEEI LTVETTPLAS SIDSSGVIIG KLVLFSKNLP SKYEDWEAGT KALLDKENII GMGSIGSVYR ASFEGGVSIA VKKLETLGRI RNQEEFEQEI
501: GRLGGLQHPN LSSFQGYYFS STMQLILSEF VPNGSLYDNL HLRIFPGTSS SYGNTDLNWH RRFQIALGTA KALSFLHNDC KPAILHLNVK STNILLDERY
601: EAKLSDYGLE KFLPVMDSFG LTKKFHNAVG YIAPELAQQS LRASEKCDVY SYGVVLLELV TGRKPVESPS ENQVLILRDY VRDLLETGSA SDCFDRRLRE
701: FEENELIQVM KLGLLCTSEN PLKRPSMAEV VQVLESIRNG FGS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.